RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 STK11Q15831 433 aa15.88■□□□□ 0.13
MKS1-209ENST00000580127 CHRFAM7AQ494W8 412 aa15.88■□□□□ 0.13
MKS1-209ENST00000580127 ZNF385BQ569K4 471 aa15.88■□□□□ 0.13
MKS1-209ENST00000580127 ARL13AQ5H913 290 aaPredicted RBP15.88■□□□□ 0.13
MKS1-209ENST00000580127 TIMM23BQ5SRD1 257 aa15.88■□□□□ 0.13
MKS1-209ENST00000580127 TMCO5AQ8N6Q1 288 aa15.88■□□□□ 0.13
MKS1-209ENST00000580127 ZNF614Q8N883 585 aa15.88■□□□□ 0.13
MKS1-209ENST00000580127 CLHC1Q8NHS4 586 aa15.88■□□□□ 0.13
MKS1-209ENST00000580127 OR5P2Q8WZ92 322 aa15.88■□□□□ 0.13
MKS1-209ENST00000580127 PPP3R2Q96LZ3 170 aa15.88■□□□□ 0.13
MKS1-209ENST00000580127 SRXN1Q9BYN0 137 aa15.88■□□□□ 0.13
MKS1-209ENST00000580127 TRIM2Q9C040 744 aa15.88■□□□□ 0.13
MKS1-209ENST00000580127 ATP6V1HQ9UI12 483 aa15.88■□□□□ 0.13
MKS1-209ENST00000580127 MGAT4BQ9UQ53 548 aa15.88■□□□□ 0.13
MKS1-209ENST00000580127 CADP27708 2225 aa15.88■□□□□ 0.13
MKS1-209ENST00000580127 NUP214P35658 2090 aaPredicted RBP15.87■□□□□ 0.13
MKS1-209ENST00000580127 DPRXA6NFQ7 191 aa15.87■□□□□ 0.13
MKS1-209ENST00000580127 DUXAA6NLW8 204 aa15.87■□□□□ 0.13
MKS1-209ENST00000580127 A8MV72 311 aaPredicted RBP15.87■□□□□ 0.13
MKS1-209ENST00000580127 ZNF264O43296 627 aa15.87■□□□□ 0.13
MKS1-209ENST00000580127 EFNA2O43921 213 aa15.87■□□□□ 0.13
MKS1-209ENST00000580127 TRIM13O60858 407 aa15.87■□□□□ 0.13
MKS1-209ENST00000580127 LYPLA1O75608 230 aaPredicted RBP15.87■□□□□ 0.13
MKS1-209ENST00000580127 FGF4P08620 206 aa15.87■□□□□ 0.13
MKS1-209ENST00000580127 BMP4P12644 408 aa15.87■□□□□ 0.13
MKS1-209ENST00000580127 PRKCAP17252 672 aa15.87■□□□□ 0.13
MKS1-209ENST00000580127 GGT1P19440 569 aa15.87■□□□□ 0.13
MKS1-209ENST00000580127 KRTAP1-1Q07627 177 aa15.87■□□□□ 0.13
MKS1-209ENST00000580127 DCST2Q5T1A1 773 aa15.87■□□□□ 0.13
MKS1-209ENST00000580127 KLHL17Q6TDP4 642 aa15.87■□□□□ 0.13
MKS1-209ENST00000580127 GALNT5Q7Z7M9 940 aa15.87■□□□□ 0.13
MKS1-209ENST00000580127 OR5W2Q8NH69 310 aa15.87■□□□□ 0.13
MKS1-209ENST00000580127 OR2W6PQ8NHA6 318 aa15.87■□□□□ 0.13
MKS1-209ENST00000580127 RFWD2Q8NHY2 731 aa15.87■□□□□ 0.13
MKS1-209ENST00000580127 MZB1Q8WU39 189 aa15.87■□□□□ 0.13
MKS1-209ENST00000580127 TMEM234Q8WY98 164 aa15.87■□□□□ 0.13
MKS1-209ENST00000580127 EMC3Q9P0I2 261 aa15.87■□□□□ 0.13
MKS1-209ENST00000580127 ZNF724A8MTY0 619 aa15.86■□□□□ 0.13
MKS1-209ENST00000580127 ZNF814B7Z6K7 855 aa15.86■□□□□ 0.13
MKS1-209ENST00000580127 LSM1O15116 133 aaKnown RBP15.86■□□□□ 0.13
MKS1-209ENST00000580127 CFLARO15519 480 aa15.86■□□□□ 0.13
MKS1-209ENST00000580127 NTN1O95631 604 aa15.86■□□□□ 0.13
MKS1-209ENST00000580127 IGHV4-39P01824 125 aa15.86■□□□□ 0.13
MKS1-209ENST00000580127 SHC1P29353 583 aa15.86■□□□□ 0.13
MKS1-209ENST00000580127 CSNK2A1P68400 391 aaPredicted RBP15.86■□□□□ 0.13
MKS1-209ENST00000580127 PGGHGQ32M88 737 aa15.86■□□□□ 0.13
MKS1-209ENST00000580127 EXOSC6Q5RKV6 272 aaKnown RBP15.86■□□□□ 0.13
MKS1-209ENST00000580127 CBLN3Q6UW01 205 aa15.86■□□□□ 0.13
MKS1-209ENST00000580127 TMEM108Q6UXF1 575 aa15.86■□□□□ 0.13
MKS1-209ENST00000580127 KBTBD8Q8NFY9 601 aa15.86■□□□□ 0.13
MKS1-209ENST00000580127 ZHX1-C8orf76Q96EF9 292 aa15.86■□□□□ 0.13
MKS1-209ENST00000580127 OTUB1Q96FW1 271 aaPredicted RBP15.86■□□□□ 0.13
MKS1-209ENST00000580127 OR5B2Q96R09 309 aa15.86■□□□□ 0.13
MKS1-209ENST00000580127 TRAF4Q9BUZ4 470 aaPredicted RBP15.86■□□□□ 0.13
MKS1-209ENST00000580127 TNFRSF12AQ9NP84 129 aa15.86■□□□□ 0.13
MKS1-209ENST00000580127 POU2F3Q9UKI9 436 aa15.86■□□□□ 0.13
MKS1-209ENST00000580127 TRAF6Q9Y4K3 522 aa15.86■□□□□ 0.13
MKS1-209ENST00000580127 DNAJC15Q9Y5T4 150 aa15.86■□□□□ 0.13
MKS1-209ENST00000580127 PTGDR2Q9Y5Y4 395 aa15.86■□□□□ 0.13
MKS1-209ENST00000580127 SCAMP2O15127 329 aaKnown RBP15.85■□□□□ 0.13
MKS1-209ENST00000580127 SSX4O60224 188 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 CYTIPO60759 359 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 ADAM11O75078 769 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 LYZL6O75951 148 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 UBL4AP11441 157 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 KRT4P19013 534 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 EFNA1P20827 205 aaPredicted RBP15.85■□□□□ 0.13
MKS1-209ENST00000580127 FKBP2P26885 142 aaKnown RBP15.85■□□□□ 0.13
MKS1-209ENST00000580127 CCR4P51679 360 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 NUDT6P53370 316 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 CDH11P55287 796 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 RAB35Q15286 201 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 SLC25A53Q5H9E4 307 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 KANK2Q63ZY3 851 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 C3orf33Q6P1S2 294 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 CLEC2AQ6UVW9 174 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 DTX2Q86UW9 622 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 C10orf107Q8IVU9 208 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 UBE2J2Q8N2K1 259 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 OR2T11Q8NH01 316 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 SFXN5Q8TD22 340 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 NEUROG1Q92886 237 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 SPIN1Q9Y657 262 aaPredicted RBP15.85■□□□□ 0.13
MKS1-209ENST00000580127 MXRA5Q9NR99 2828 aa15.85■□□□□ 0.13
MKS1-209ENST00000580127 STAB1Q9NY15 2570 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 CIB4A0PJX0 185 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 SULT2B1O00204 365 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 GPR171O14626 319 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 ABCD4O14678 606 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 AK1P00568 194 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 PRPS1L1P21108 318 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 PTAFRP25105 342 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 QPRTQ15274 297 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 TOMM34Q15785 309 aaPredicted RBP15.84■□□□□ 0.13
MKS1-209ENST00000580127 TIGD2Q4W5G0 525 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 ATP6AP1LQ52LC2 224 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 FBXL14Q8N1E6 418 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 OR7A2PQ8NGA2 310 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 PSMA8Q8TAA3 256 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 ST8SIA1Q92185 356 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms