RNA–Protein interactions for RNA: ENST00000575320.1

TFAP4-206, Transcript of transcription factor AP-4, humanhuman

TSL 2

Gene TFAP4, Length 6,491 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP4-206ENST00000575320 COPS3Q9UNS2 423 aa13.12□□□□□ -0.31
TFAP4-206ENST00000575320 RASD1Q9Y272 281 aa13.12□□□□□ -0.31
TFAP4-206ENST00000575320 SPEF2Q9C093 1822 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 ZNF840PA6NDX5 716 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 CD300LBA8K4G0 201 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 DVL2O14641 736 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 ADAMTS4O75173 837 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 IL1RNP18510 177 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 GCH1P30793 250 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 CCL11P51671 97 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 USP36Q9P275 1121 aaKnown RBP13.11□□□□□ -0.31
TFAP4-206ENST00000575320 SRPK3Q9UPE1 567 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 A0A1W2PS29 197 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 RNASET2O00584 256 aaKnown RBP13.11□□□□□ -0.31
TFAP4-206ENST00000575320 GPR32O75388 356 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 SERPINE2P07093 398 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 GABRR1P24046 479 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 MRPS10P82664 201 aaKnown RBP13.11□□□□□ -0.31
TFAP4-206ENST00000575320 SCAPQ12770 1279 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 STK11Q15831 433 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 FIGLAQ6QHK4 219 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 AGBL5Q8NDL9 886 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 SORT1Q99523 831 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 RANGRFQ9HD47 186 aaPredicted RBP13.11□□□□□ -0.31
TFAP4-206ENST00000575320 PRMT8Q9NR22 394 aaPredicted RBP13.11□□□□□ -0.31
TFAP4-206ENST00000575320 ZCWPW2A0A1B0GU75 182 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 CRABP1P29762 137 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 TNFSF8P32971 234 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 RAB40BQ12829 278 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 GPR155Q7Z3F1 870 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 CD163Q86VB7 1156 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 FOXRED1Q96CU9 486 aaPredicted RBP13.11□□□□□ -0.31
TFAP4-206ENST00000575320 SENP5Q96HI0 755 aaPredicted RBP13.11□□□□□ -0.31
TFAP4-206ENST00000575320 GLTPQ9NZD2 209 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 TSPAN11A1L157 253 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 NCR1O76036 304 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 STC2O76061 302 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 LCATP04180 440 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 FGF4P08620 206 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 RPL23AP62750 156 aaKnown RBP13.11□□□□□ -0.31
TFAP4-206ENST00000575320 PPP1R3BQ86XI6 285 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 MRPL41Q8IXM3 137 aaKnown RBP13.11□□□□□ -0.31
TFAP4-206ENST00000575320 LILRB4Q8NHJ6 448 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 TMEM239Q8WW34 195 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 RLN3Q8WXF3 142 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 ZNF587Q96SQ5 575 aaPredicted RBP13.11□□□□□ -0.31
TFAP4-206ENST00000575320 SAP130Q9H0E3 1048 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 MEIS3P2A8K0S8 358 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 AFF3P51826 1226 aaKnown RBP13.11□□□□□ -0.31
TFAP4-206ENST00000575320 C12orf45Q8N5I9 185 aaPredicted RBP13.11□□□□□ -0.31
TFAP4-206ENST00000575320 GIMAP1Q8WWP7 306 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 RBM24Q9BX46 236 aaKnown RBP13.11□□□□□ -0.31
TFAP4-206ENST00000575320 TMEM9BQ9NQ34 198 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 HAO2Q9NYQ3 351 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 ACTR10Q9NZ32 417 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 MCTS1Q9ULC4 181 aaKnown RBP13.11□□□□□ -0.31
TFAP4-206ENST00000575320 V9GY05 133 aa13.11□□□□□ -0.31
TFAP4-206ENST00000575320 ZNF623O75123 536 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 CD68P34810 354 aaPredicted RBP13.1□□□□□ -0.31
TFAP4-206ENST00000575320 HMGCLP35914 325 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 MC3RP41968 323 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 GK3PQ14409 553 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 PLGLAQ15195 96 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 TATDN3Q17R31 274 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 CNEP1R1Q8N9A8 125 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 SLC38A1Q9H2H9 487 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 KCND3Q9UK17 655 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 PIP5K1CO60331 668 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 MED6O75586 246 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 FUT1P19526 365 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 IL32P24001 234 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 C3orf38Q5JPI3 329 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 SERINC2Q96SA4 455 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 GMLQ99445 158 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 TP53TG5Q9Y2B4 290 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 FRS3O43559 492 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 ADARB1P78563 741 aaKnown RBP13.1□□□□□ -0.31
TFAP4-206ENST00000575320 VEZF1Q14119 521 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 NADSYN1Q6IA69 706 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 NIPAL3Q6P499 406 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 PDLIM7Q9NR12 457 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 CXXC1Q9P0U4 656 aaPredicted RBP13.1□□□□□ -0.31
TFAP4-206ENST00000575320 F5H5K5 113 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 MPPED1O15442 326 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 SEC14L2O76054 403 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 TGM6O95932 706 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 DHRS4L1P0CG22 281 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 HSD17B7P56937 341 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 SOX4Q06945 474 aaPredicted RBP13.1□□□□□ -0.31
TFAP4-206ENST00000575320 UBE2NLQ5JXB2 153 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 HACD4Q5VWC8 232 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 SERPINA11Q86U17 422 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 GCDHQ92947 438 aaPredicted RBP13.1□□□□□ -0.31
TFAP4-206ENST00000575320 ARAFP10398 606 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 GDF1P27539 372 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 ZNF789Q5FWF6 425 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 ZNF761Q86XN6 746 aaPredicted RBP13.1□□□□□ -0.31
TFAP4-206ENST00000575320 KCMF1Q9P0J7 381 aa13.1□□□□□ -0.31
TFAP4-206ENST00000575320 RPS10-NUDT3A0A1W2PQS6 291 aa13.09□□□□□ -0.31
TFAP4-206ENST00000575320 HLA-DMAP28067 261 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms