RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 PEX5LQ8IYB4 626 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 BEST3Q8N1M1 668 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 SMYD1Q8NB12 490 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 PAPD5Q8NDF8 572 aaKnown RBP12.51□□□□□ -0.41
RPAIN-209ENST00000571558 CANT1Q8WVQ1 401 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 POP5Q969H6 163 aaKnown RBP12.51□□□□□ -0.41
RPAIN-209ENST00000571558 NTNG2Q96CW9 530 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 SPACA9Q96E40 222 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-209ENST00000571558 PYURFQ96I23 114 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 HSH2DQ96JZ2 352 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 SIGLEC12Q96PQ1 595 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 DOHHQ9BU89 302 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 PINK1Q9BXM7 581 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 HOXD1Q9GZZ0 328 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 SH2D2AQ9NP31 389 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 ADPRHL2Q9NX46 363 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 IFT52Q9Y366 437 aa12.51□□□□□ -0.41
RPAIN-209ENST00000571558 CLDN24A6NM45 220 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 OXSR1O95747 527 aaPredicted RBP12.5□□□□□ -0.41
RPAIN-209ENST00000571558 LGI1O95970 557 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 FESP07332 822 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 SP1P08047 785 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 HOXD4P09016 255 aaPredicted RBP12.5□□□□□ -0.41
RPAIN-209ENST00000571558 UMPSP11172 480 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 MSX1P28360 303 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 ADH7P40394 386 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 ST13P50502 369 aaKnown RBP12.5□□□□□ -0.41
RPAIN-209ENST00000571558 KCNJ10P78508 379 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 FGFBP1Q14512 234 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 LIN52Q52LA3 116 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 ZNF311Q5JNZ3 666 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 SLC25A25Q6KCM7 469 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 ZNF836Q6ZNA1 936 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 TSEN54Q7Z6J9 526 aaKnown RBP12.5□□□□□ -0.41
RPAIN-209ENST00000571558 TMEM200AQ86VY9 491 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 DND1Q8IYX4 353 aaKnown RBP12.5□□□□□ -0.41
RPAIN-209ENST00000571558 POGLUT1Q8NBL1 392 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 OR10G3Q8NGC4 313 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 RASSF5Q8WWW0 418 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 C7orf34Q96L11 122 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 NODALQ96S42 347 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 WFDC6Q9BQY6 131 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 RTN4RQ9BZR6 473 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 TSPAN10Q9H1Z9 355 aaPredicted RBP12.5□□□□□ -0.41
RPAIN-209ENST00000571558 MAGIXQ9H6Y5 334 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 TRIM45Q9H8W5 580 aaPredicted RBP12.5□□□□□ -0.41
RPAIN-209ENST00000571558 KCNJ16Q9NPI9 418 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 KLHL1Q9NR64 748 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 CCM2LQ9NUG4 571 aaPredicted RBP12.5□□□□□ -0.41
RPAIN-209ENST00000571558 DTNAQ9Y4J8 743 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 CHCHD2Q9Y6H1 151 aaPredicted RBP12.5□□□□□ -0.41
RPAIN-209ENST00000571558 ACANP16112 2415 aa12.5□□□□□ -0.41
RPAIN-209ENST00000571558 EXPH5Q8NEV8 1989 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 A0A1W2PQD3 144 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 CDHR4A6H8M9 788 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 ALG1L2C9J202 215 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 H3BNX3 289 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 SYT5O00445 386 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 BCAS1O75363 584 aaPredicted RBP12.49□□□□□ -0.41
RPAIN-209ENST00000571558 IL7RP16871 459 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 ZNF24P17028 368 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 HLCSP50747 726 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 TFF3Q07654 80 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 LARS2Q15031 903 aaKnown RBP12.49□□□□□ -0.41
RPAIN-209ENST00000571558 CD226Q15762 336 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 IQCCQ4KMZ1 466 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 SPINK14Q6IE38 97 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 TMEM81Q6P7N7 255 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 IL20RBQ6UXL0 311 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 NCCRP1Q6ZVX7 275 aaPredicted RBP12.49□□□□□ -0.41
RPAIN-209ENST00000571558 GALNTL5Q7Z4T8 443 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 ZNF227Q86WZ6 799 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 CLIP4Q8N3C7 705 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 ZNF527Q8NB42 609 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 FAM71CQ8NEG0 241 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 OR4D11Q8NGI4 311 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 FAM57AQ8TBR7 257 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 SLC26A7Q8TE54 656 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 ASB15Q8WXK1 588 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 LZICQ8WZA0 190 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 RSRC1Q96IZ7 334 aaKnown RBP12.49□□□□□ -0.41
RPAIN-209ENST00000571558 TPD52L3Q96J77 140 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 RLIMQ9NVW2 624 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 BAG5Q9UL15 447 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 ABCG2Q9UNQ0 655 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 ZNF232Q9UNY5 417 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 V9GYQ6 96 aa12.49□□□□□ -0.41
RPAIN-209ENST00000571558 SERINC4A6NH21 518 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 SCDO00767 359 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 HS6ST1O60243 411 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 NEURL1O76050 574 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 TOXO94900 526 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 TNFRSF1BP20333 461 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 PSMA4P25789 261 aaKnown RBP12.48□□□□□ -0.41
RPAIN-209ENST00000571558 SLC7A1P30825 629 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 EVI2BP34910 448 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 PTGS2P35354 604 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 PTGDSP41222 190 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 MAGEA2P43356 314 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 RNF144AP50876 292 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms