RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 MGST3O14880 152 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 EEDO75530 441 aaKnown RBP6.52□□□□□ -1.37
CNOT1-222ENST00000570139 CIB2O75838 187 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 RLN1P04808 185 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 ZNF10P21506 573 aaPredicted RBP6.52□□□□□ -1.37
CNOT1-222ENST00000570139 TIA1P31483 386 aaKnown RBP eCLIP6.52□□□□□ -1.37
CNOT1-222ENST00000570139 HPCAL1P37235 193 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 DHPSP49366 369 aaPredicted RBP6.52□□□□□ -1.37
CNOT1-222ENST00000570139 NUDT2P50583 147 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 POLR2JP52435 117 aaKnown RBP6.52□□□□□ -1.37
CNOT1-222ENST00000570139 CLDN8P56748 225 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 STXBP1P61764 594 aaKnown RBP6.52□□□□□ -1.37
CNOT1-222ENST00000570139 RPS13P62277 151 aaKnown RBP6.52□□□□□ -1.37
CNOT1-222ENST00000570139 TRA2BP62995 288 aaKnown RBP6.52□□□□□ -1.37
CNOT1-222ENST00000570139 HMGCS1Q01581 520 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 CFHR1Q03591 330 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 ZNF763Q0D2J5 394 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 FOXE3Q13461 319 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 KIAA0040Q15053 153 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 CDSNQ15517 529 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 RFTN2Q52LD8 501 aaPredicted RBP6.52□□□□□ -1.37
CNOT1-222ENST00000570139 TCHHL1Q5QJ38 904 aaPredicted RBP6.52□□□□□ -1.37
CNOT1-222ENST00000570139 MANEAQ5SRI9 462 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 DCST1Q5T197 706 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.52□□□□□ -1.37
CNOT1-222ENST00000570139 FNDC7Q5VTL7 733 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 IL23RQ5VWK5 629 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 NSUN5P2Q63ZY6 315 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 ETFRF1Q6IPR1 90 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 ZNF425Q6IV72 752 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 NIPAL1Q6NVV3 410 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 NOXRED1Q6NXP6 359 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 TMEM71Q6P5X7 295 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 SPESP1Q6UW49 350 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 C17orf82Q86X59 251 aaPredicted RBP6.52□□□□□ -1.37
CNOT1-222ENST00000570139 NAGSQ8N159 534 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 PAPD5Q8NDF8 572 aaKnown RBP6.52□□□□□ -1.37
CNOT1-222ENST00000570139 CCL4L1Q8NHW4 92 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 LMX1AQ8TE12 382 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 SPDL1Q96EA4 605 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 GFM1Q96RP9 751 aaKnown RBP6.52□□□□□ -1.37
CNOT1-222ENST00000570139 MTERF1Q99551 399 aaKnown RBP6.52□□□□□ -1.37
CNOT1-222ENST00000570139 C1orf50Q9BV19 199 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 TBC1D10AQ9BXI6 508 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 DPY30Q9C005 99 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 CHRNA10Q9GZZ6 450 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 RAB33BQ9H082 229 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 RMND5AQ9H871 391 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 THSD1Q9NS62 852 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 FARSBQ9NSD9 589 aaKnown RBP6.52□□□□□ -1.37
CNOT1-222ENST00000570139 ATAD3AQ9NVI7 634 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 TAS2R1Q9NYW7 299 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 TRPC4Q9UBN4 977 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 IL19Q9UHD0 177 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 CIDEBQ9UHD4 219 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 PILRBQ9UKJ0 227 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 POLR3HQ9Y535 204 aaPredicted RBP6.52□□□□□ -1.37
CNOT1-222ENST00000570139 PTGDR2Q9Y5Y4 395 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 AP1M2Q9Y6Q5 423 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 TRIOO75962 3097 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 TRBV5-3A0A0A0MS03 114 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 A0A0J9YY10 115 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 GSAPA4D1B5 854 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 OR5K3A6NET4 321 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 B4DGG1 531 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 NR5A2O00482 541 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 TXNDC9O14530 226 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 MRASO14807 208 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 NUDT21O43809 227 aaKnown RBP6.51□□□□□ -1.37
CNOT1-222ENST00000570139 SSX4O60224 188 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 PCDH7O60245 1069 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 EML2O95834 649 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 PDGFBP01127 241 aaPredicted RBP6.51□□□□□ -1.37
CNOT1-222ENST00000570139 SLC35G6P0C7Q6 338 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 DANCRP0C864 163 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 G6PDP11413 515 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 BCKDHAP12694 445 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 ZNF20P17024 532 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 SDC1P18827 310 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 CAPZBP47756 277 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 CSNK1EP49674 416 aaKnown RBP6.51□□□□□ -1.37
CNOT1-222ENST00000570139 ASCL1P50553 236 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 RAP1GDS1P52306 607 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 DIO3P55073 304 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 SKP1P63208 163 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 CSNK1G2P78368 415 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 RGS1Q08116 209 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 DDX39BQ13838 428 aaKnown RBP6.51□□□□□ -1.37
CNOT1-222ENST00000570139 MELKQ14680 651 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 RBBP5Q15291 538 aaKnown RBP6.51□□□□□ -1.37
CNOT1-222ENST00000570139 DUOXA1Q1HG43 343 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 TRMT5Q32P41 509 aaKnown RBP6.51□□□□□ -1.37
CNOT1-222ENST00000570139 ADPRMQ3LIE5 342 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 C14orf28Q4W4Y0 310 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 KLHL26Q53HC5 615 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 PIK3CD-AS1Q5SR53 167 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 KHDRBS2Q5VWX1 349 aaKnown RBP6.51□□□□□ -1.37
CNOT1-222ENST00000570139 REP15Q6BDI9 236 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 SCIMPQ6UWF3 145 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 ZNF793Q6ZN11 406 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms