RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 LAT2Q9GZY6 243 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 QRSL1Q9H0R6 528 aaKnown RBP11.7□□□□□ -0.54
CNOT1-220ENST00000569916 SLC38A1Q9H2H9 487 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 PIGMQ9H3S5 423 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 RMND5AQ9H871 391 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 ZNF446Q9NWS9 450 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 CRIM1Q9NZV1 1036 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 A8MXE2 369 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 CXCL13O43927 109 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 CYP7B1O75881 506 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 KRT75O95678 551 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 UBTFL6P0CB48 400 aaPredicted RBP11.69□□□□□ -0.54
CNOT1-220ENST00000569916 FCGR2AP12318 317 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 HOXB9P17482 250 aaPredicted RBP11.69□□□□□ -0.54
CNOT1-220ENST00000569916 SFTPDP35247 375 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 PGM1P36871 562 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 KIR2DL2P43627 348 aaPredicted RBP11.69□□□□□ -0.54
CNOT1-220ENST00000569916 KIR2DL3P43628 341 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 SLC6A8P48029 635 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 SIRPAP78324 504 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 SORDQ00796 357 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 CBFBQ13951 182 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 MAPK11Q15759 364 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 C6orf10Q5SRN2 563 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 SLC2A7Q6PXP3 512 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 LRRC74BQ6ZQY2 392 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 EIF3MQ7L2H7 374 aaKnown RBP11.69□□□□□ -0.54
CNOT1-220ENST00000569916 HMGN2P46Q86SG4 172 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 LILRA2Q8N149 483 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 CNEP1R1Q8N9A8 125 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 OR2V1Q8NHB1 315 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 STON2Q8WXE9 905 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 GTF2H4Q92759 462 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 STARD4Q96DR4 205 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 AURKBQ96GD4 344 aaPredicted RBP11.69□□□□□ -0.54
CNOT1-220ENST00000569916 THUMPD3Q9BV44 507 aaKnown RBP11.69□□□□□ -0.54
CNOT1-220ENST00000569916 RBM24Q9BX46 236 aaKnown RBP11.69□□□□□ -0.54
CNOT1-220ENST00000569916 PAIP1Q9H074 479 aaKnown RBP11.69□□□□□ -0.54
CNOT1-220ENST00000569916 TPT1P8Q9HAU6 139 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 PAQR5Q9NXK6 330 aaPredicted RBP11.69□□□□□ -0.54
CNOT1-220ENST00000569916 GALNT8Q9NY28 637 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 LIPT1Q9Y234 373 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 SLC35A3Q9Y2D2 325 aa11.69□□□□□ -0.54
CNOT1-220ENST00000569916 AGAP5A6NIR3 686 aa11.68□□□□□ -0.54
CNOT1-220ENST00000569916 CLDN24A6NM45 220 aa11.68□□□□□ -0.54
CNOT1-220ENST00000569916 MSTNO14793 375 aa11.68□□□□□ -0.54
CNOT1-220ENST00000569916 EDF1O60869 148 aaKnown RBP11.68□□□□□ -0.54
CNOT1-220ENST00000569916 ANP32DO95626 131 aa11.68□□□□□ -0.54
CNOT1-220ENST00000569916 ETFAP13804 333 aa11.68□□□□□ -0.54
CNOT1-220ENST00000569916 NID1P14543 1247 aa11.68□□□□□ -0.54
CNOT1-220ENST00000569916 RPS4Y1P22090 263 aaKnown RBP11.68□□□□□ -0.54
CNOT1-220ENST00000569916 MAGEA8P43361 318 aa11.68□□□□□ -0.54
CNOT1-220ENST00000569916 CPA2P48052 419 aa11.68□□□□□ -0.54
CNOT1-220ENST00000569916 SELENBP1Q13228 472 aa11.68□□□□□ -0.54
CNOT1-220ENST00000569916 HBMQ6B0K9 141 aa11.68□□□□□ -0.54
CNOT1-220ENST00000569916 BLOC1S3Q6QNY0 202 aa11.68□□□□□ -0.54
CNOT1-220ENST00000569916 BTLAQ7Z6A9 289 aa11.68□□□□□ -0.54
CNOT1-220ENST00000569916 KIF18BQ86Y91 864 aa11.68□□□□□ -0.54
CNOT1-220ENST00000569916 ZZZ3Q8IYH5 903 aa11.68□□□□□ -0.54
CNOT1-220ENST00000569916 ST8SIA1Q92185 356 aa11.68□□□□□ -0.54
CNOT1-220ENST00000569916 THOC1Q96FV9 657 aaKnown RBP11.68□□□□□ -0.54
CNOT1-220ENST00000569916 COQ10BQ9H8M1 238 aa11.68□□□□□ -0.54
CNOT1-220ENST00000569916 SLC52A3Q9NQ40 469 aa11.68□□□□□ -0.54
CNOT1-220ENST00000569916 CCDC167Q9P0B6 97 aa11.68□□□□□ -0.54
CNOT1-220ENST00000569916 MCTS1Q9ULC4 181 aaKnown RBP11.68□□□□□ -0.54
CNOT1-220ENST00000569916 PCDHB14Q9Y5E9 798 aa11.68□□□□□ -0.54
CNOT1-220ENST00000569916 ANKHD1Q8IWZ3 2542 aaKnown RBP11.68□□□□□ -0.54
CNOT1-220ENST00000569916 TACC2O95359 2948 aa11.67□□□□□ -0.54
CNOT1-220ENST00000569916 DSPPQ9NZW4 1301 aa11.67□□□□□ -0.54
CNOT1-220ENST00000569916 NR5A2O00482 541 aa11.67□□□□□ -0.54
CNOT1-220ENST00000569916 ADAM11O75078 769 aa11.67□□□□□ -0.54
CNOT1-220ENST00000569916 SMNDC1O75940 238 aaKnown RBP eCLIP11.67□□□□□ -0.54
CNOT1-220ENST00000569916 CGAP01215 116 aa11.67□□□□□ -0.54
CNOT1-220ENST00000569916 NR2F1P10589 423 aa11.67□□□□□ -0.54
CNOT1-220ENST00000569916 PGCP20142 388 aa11.67□□□□□ -0.54
CNOT1-220ENST00000569916 CAPN3P20807 821 aa11.67□□□□□ -0.54
CNOT1-220ENST00000569916 CRATP43155 626 aa11.67□□□□□ -0.54
CNOT1-220ENST00000569916 ATP4BP51164 291 aa11.67□□□□□ -0.54
CNOT1-220ENST00000569916 DSTNP60981 165 aa11.67□□□□□ -0.54
CNOT1-220ENST00000569916 KCNJ10P78508 379 aa11.67□□□□□ -0.54
CNOT1-220ENST00000569916 SQLEQ14534 574 aa11.67□□□□□ -0.54
CNOT1-220ENST00000569916 ZNF239Q16600 458 aaKnown RBP11.67□□□□□ -0.54
CNOT1-220ENST00000569916 PDSS1Q5T2R2 415 aa11.67□□□□□ -0.54
CNOT1-220ENST00000569916 PPP4R4Q6NUP7 873 aa11.67□□□□□ -0.54
CNOT1-220ENST00000569916 FAM222BQ8WU58 562 aa11.67□□□□□ -0.54
CNOT1-220ENST00000569916 SPDL1Q96EA4 605 aa11.67□□□□□ -0.54
CNOT1-220ENST00000569916 SRXN1Q9BYN0 137 aa11.67□□□□□ -0.54
CNOT1-220ENST00000569916 PRRG4Q9BZD6 226 aa11.67□□□□□ -0.54
CNOT1-220ENST00000569916 OPN3Q9H1Y3 402 aaPredicted RBP11.67□□□□□ -0.54
CNOT1-220ENST00000569916 EXOSC3Q9NQT5 275 aaKnown RBP11.67□□□□□ -0.54
CNOT1-220ENST00000569916 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.67□□□□□ -0.54
CNOT1-220ENST00000569916 P2RX2Q9UBL9 471 aa11.67□□□□□ -0.54
CNOT1-220ENST00000569916 A0A096LPI6 279 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 TUBAL3A6NHL2 446 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 GJE1A6NN92 205 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 SS18L1O75177 396 aaPredicted RBP11.66□□□□□ -0.54
CNOT1-220ENST00000569916 SYNGR4O95473 234 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 BCHEP06276 602 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 TFPTP0C1Z6 253 aa11.66□□□□□ -0.54
CNOT1-220ENST00000569916 CD8BP10966 210 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms