RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 TNFSF11O14788 317 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 HDAC3O15379 428 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 ZNF264O43296 627 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 EIF4E2O60573 245 aaKnown RBP12.94□□□□□ -0.34
CMTM3-215ENST00000568477 STX11O75558 287 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 CGAP01215 116 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 HRGP04196 525 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 POU2F1P14859 743 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 ADH6P28332 368 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 SFTPDP35247 375 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 KCNJ5P48544 419 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 CCR4P51679 360 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 CTBP2P56545 445 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 PHC1P78364 1004 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 GPR68Q15743 365 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 FAM174BQ3ZCQ3 159 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 PDZK1Q5T2W1 519 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 SPATA19Q7Z5L4 167 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 TOR1AIP2Q8NFQ8 470 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 OR6K3Q8NGY3 331 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 RFWD2Q8NHY2 731 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 FBXO27Q8NI29 283 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 GMPPAQ96IJ6 420 aaPredicted RBP12.94□□□□□ -0.34
CMTM3-215ENST00000568477 FOXC2Q99958 501 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 SIKE1Q9BRV8 207 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 ZNF350Q9GZX5 532 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 CCM2LQ9NUG4 571 aaPredicted RBP12.94□□□□□ -0.34
CMTM3-215ENST00000568477 MARCOQ9UEW3 520 aaPredicted RBP12.94□□□□□ -0.34
CMTM3-215ENST00000568477 CLEC4AQ9UMR7 237 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 C2CD3Q4AC94 2353 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 PRRC2AP48634 2157 aaKnown RBP12.93□□□□□ -0.34
CMTM3-215ENST00000568477 GJE1A6NN92 205 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 ZNF195O14628 629 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 SS18L1O75177 396 aaPredicted RBP12.93□□□□□ -0.34
CMTM3-215ENST00000568477 ALDOCP09972 364 aaKnown RBP12.93□□□□□ -0.34
CMTM3-215ENST00000568477 OR12D1P0DN82 309 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 PRKCAP17252 672 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 IL11P20809 199 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 CHI3L1P36222 383 aaPredicted RBP12.93□□□□□ -0.34
CMTM3-215ENST00000568477 KHKP50053 298 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 CASP9P55211 416 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 NME5P56597 212 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 CARD18P57730 90 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 UFM1P61960 85 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 POU4F3Q15319 338 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 ZNF141Q15928 474 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 ARHGAP11BQ3KRB8 267 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 SAXO2Q658L1 398 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 HEPHL1Q6MZM0 1159 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 TNFAIP8L2Q6P589 184 aaPredicted RBP12.93□□□□□ -0.34
CMTM3-215ENST00000568477 PAMR1Q6UXH9 720 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 CCDC121Q6ZUS5 278 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 TRPM8Q7Z2W7 1104 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 ZNF610Q8N9Z0 462 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 OR5W2Q8NH69 310 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 GPR119Q8TDV5 335 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 C10orf82Q8WW14 230 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 XAGE5Q8WWM1 108 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 OSTF1Q92882 214 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 ARSGQ96EG1 525 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 NEURL3Q96EH8 262 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 MRGPRX4Q96LA9 322 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 CCDC115Q96NT0 180 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 ZBTB18Q99592 522 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 MED18Q9BUE0 208 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 WDR55Q9H6Y2 383 aaPredicted RBP12.93□□□□□ -0.34
CMTM3-215ENST00000568477 TIGARQ9NQ88 270 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 GLRX2Q9NS18 164 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 BTNL2Q9UIR0 455 aa12.93□□□□□ -0.34
CMTM3-215ENST00000568477 GOLGA8QA0A0J9YX86 632 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 GOLGA8OA6NCC3 632 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 GOLGA8NF8WBI6 632 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 SLCO1B7G3V0H7 640 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 C16orf97H3BN30 126 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 KIAA0513O60268 411 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 FCMRO60667 390 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 DCTN3O75935 186 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 CSTAP01040 98 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 PABPC4LP0CB38 370 aaKnown RBP12.92□□□□□ -0.34
CMTM3-215ENST00000568477 KITP10721 976 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 EPHA3P29320 983 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 SHC1P29353 583 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 CCKARP32238 428 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 UGT2B10P36537 528 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 SKP2Q13309 424 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 CBFBQ13951 182 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 QPRTQ15274 297 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 TOMM34Q15785 309 aaPredicted RBP12.92□□□□□ -0.34
CMTM3-215ENST00000568477 ZNF239Q16600 458 aaKnown RBP12.92□□□□□ -0.34
CMTM3-215ENST00000568477 EXOC3L2Q2M3D2 409 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 GTF2IRD2BQ6EKJ0 949 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 OLIG3Q7RTU3 272 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 GTF2IRD2Q86UP8 949 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 OIT3Q8WWZ8 545 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 RAB8BQ92930 207 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 CPNE4Q96A23 557 aaPredicted RBP12.92□□□□□ -0.34
CMTM3-215ENST00000568477 REXO5Q96IC2 774 aaKnown RBP12.92□□□□□ -0.34
CMTM3-215ENST00000568477 TEX37Q96LM6 180 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 WFIKKN1Q96NZ8 548 aa12.92□□□□□ -0.34
CMTM3-215ENST00000568477 SLC35A5Q9BS91 424 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms