RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 OR8D4Q8NGM9 314 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 OR8J1Q8NGP2 316 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 OSTF1Q92882 214 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 MYDGFQ969H8 173 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 RELTQ969Z4 430 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 LRR1Q96L50 414 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 SAMD8Q96LT4 415 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 TEX12Q9BXU0 123 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 NAA50Q9GZZ1 169 aaKnown RBP6.49□□□□□ -1.37
SMG1-215ENST00000568239 PISDQ9UG56 409 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 PSORS1C1Q9UIG5 152 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 PTRH2Q9Y3E5 179 aaKnown RBP6.49□□□□□ -1.37
SMG1-215ENST00000568239 B3GALT1Q9Y5Z6 326 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 COMMD3-BMI1R4GMX3 469 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 PCNX3Q9H6A9 2034 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 ZNF318Q5VUA4 2279 aa6.49□□□□□ -1.37
SMG1-215ENST00000568239 TRAV27A0A087WT01 109 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 SAGE2PA6NJ88 616 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 ZNF264O43296 627 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 GALR2O43603 387 aaPredicted RBP6.48□□□□□ -1.37
SMG1-215ENST00000568239 RFPL3O75679 317 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 TTKP33981 857 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 STAT5AP42229 794 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 MC2RQ01718 297 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 C12orf73Q69YU5 71 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 ALPK2Q86TB3 2170 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 NAXDQ8IW45 347 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 RNF113BQ8IZP6 322 aaKnown RBP6.48□□□□□ -1.37
SMG1-215ENST00000568239 SVOPQ8N4V2 548 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 APCDD1LQ8NCL9 501 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 OR13C2Q8NGS9 318 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 ISOC1Q96CN7 298 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 DNAJA3Q96EY1 480 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 Q96MT0 163 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 SLC38A2Q96QD8 506 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 DCUN1D5Q9BTE7 237 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 POLR2J2Q9GZM3 115 aaKnown RBP6.48□□□□□ -1.37
SMG1-215ENST00000568239 MEPEQ9NQ76 525 aaPredicted RBP6.48□□□□□ -1.37
SMG1-215ENST00000568239 C19orf25Q9UFG5 118 aaPredicted RBP6.48□□□□□ -1.37
SMG1-215ENST00000568239 LOXL2Q9Y4K0 774 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 UNC119BA6NIH7 251 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 VSTM2BA6NLU5 285 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 OR6C76A6NM76 312 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 C4orf47A7E2U8 309 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 ZNF99A8MXY4 864 aaPredicted RBP6.48□□□□□ -1.37
SMG1-215ENST00000568239 OIP5O43482 229 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 LCKP06239 509 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 GUSBP08236 651 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 JMJD7P0C870 316 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 HSMCR30P0CW71 290 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 CD59P13987 128 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 PCMT1P22061 227 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 MASP1P48740 699 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 GPR143P51810 404 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 CDK5Q00535 292 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 ZSWIM7Q19AV6 140 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 SLC35F1Q5T1Q4 408 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 DCAF12Q5T6F0 453 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 OR5M10Q6IEU7 315 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 BORAQ6PGQ7 559 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 B3GNT6Q6ZMB0 384 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 ZNF620Q6ZNG0 422 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 DBX2Q6ZNG2 339 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 RAB11FIP2Q7L804 512 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 PRSS48Q7RTY5 328 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 SLC34A3Q8N130 599 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 C10orf53Q8N6V4 93 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 OR52L1Q8NGH7 329 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 OR13F1Q8NGS4 319 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 FANK1Q8TC84 345 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 FAR1Q8WVX9 515 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 TRUB1Q8WWH5 349 aaKnown RBP6.48□□□□□ -1.37
SMG1-215ENST00000568239 NACC2Q96BF6 587 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 MYCBPQ99417 103 aaPredicted RBP6.48□□□□□ -1.37
SMG1-215ENST00000568239 RTN4RQ9BZR6 473 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 STRADBQ9C0K7 418 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 OR52D1Q9H346 318 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 TMEM9BQ9NQ34 198 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 FBXO8Q9NRD0 319 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 TAS2R16Q9NYV7 291 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 ZNF223Q9UK11 482 aaPredicted RBP6.48□□□□□ -1.37
SMG1-215ENST00000568239 PCDHGB2Q9Y5G2 931 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 SDK2Q58EX2 2172 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 PMS2P1A4D2B8 440 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 C2orf72A6NCS6 295 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 ELOA3DA6NLF2 546 aaPredicted RBP6.48□□□□□ -1.37
SMG1-215ENST00000568239 ENO4A6NNW6 628 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 EFCAB9A8MZ26 197 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 LRRN3E7EW58 273 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 APOL3O95236 402 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 CDK1P06493 297 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 NGFRP08138 427 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 TBXA2RP21731 343 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 ETV5P41161 510 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 BTBD16Q32M84 506 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 ELOA3BQ3SY89 546 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 AP1ARQ63HQ0 302 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 MRPL14Q6P1L8 145 aaKnown RBP6.48□□□□□ -1.37
SMG1-215ENST00000568239 OAFQ86UD1 273 aa6.48□□□□□ -1.37
SMG1-215ENST00000568239 LSMEM1Q8N8F7 131 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms