RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 THBDP07204 575 aa16.59■□□□□ 0.25
LINC01238-205ENST00000567549 EFNA1P20827 205 aaPredicted RBP16.59■□□□□ 0.25
LINC01238-205ENST00000567549 FKBP2P26885 142 aaKnown RBP16.59■□□□□ 0.25
LINC01238-205ENST00000567549 CCR4P51679 360 aa16.59■□□□□ 0.25
LINC01238-205ENST00000567549 C21orf58P58505 322 aa16.59■□□□□ 0.25
LINC01238-205ENST00000567549 RPS4XP62701 263 aaKnown RBP16.59■□□□□ 0.25
LINC01238-205ENST00000567549 PTGR1Q14914 329 aa16.59■□□□□ 0.25
LINC01238-205ENST00000567549 TMEM176BQ3YBM2 270 aaPredicted RBP16.59■□□□□ 0.25
LINC01238-205ENST00000567549 ATAD3BQ5T9A4 648 aa16.59■□□□□ 0.25
LINC01238-205ENST00000567549 ADAM5Q6NVV9 412 aa16.59■□□□□ 0.25
LINC01238-205ENST00000567549 POC1BQ8TC44 478 aa16.59■□□□□ 0.25
LINC01238-205ENST00000567549 SLC25A43Q8WUT9 341 aaPredicted RBP16.59■□□□□ 0.25
LINC01238-205ENST00000567549 ST8SIA1Q92185 356 aa16.59■□□□□ 0.25
LINC01238-205ENST00000567549 GTPBP3Q969Y2 492 aaKnown RBP16.59■□□□□ 0.25
LINC01238-205ENST00000567549 ARSGQ96EG1 525 aa16.59■□□□□ 0.25
LINC01238-205ENST00000567549 OTUB1Q96FW1 271 aaPredicted RBP16.59■□□□□ 0.25
LINC01238-205ENST00000567549 ATP6V1G3Q96LB4 118 aa16.59■□□□□ 0.25
LINC01238-205ENST00000567549 C1orf50Q9BV19 199 aa16.59■□□□□ 0.25
LINC01238-205ENST00000567549 POTEKPQ9BYX7 375 aa16.59■□□□□ 0.25
LINC01238-205ENST00000567549 FBXO34Q9NWN3 711 aa16.59■□□□□ 0.25
LINC01238-205ENST00000567549 RNF115Q9Y4L5 304 aa16.59■□□□□ 0.25
LINC01238-205ENST00000567549 ZNF469Q96JG9 3925 aaPredicted RBP16.59■□□□□ 0.25
LINC01238-205ENST00000567549 SKAP2O75563 359 aaPredicted RBP16.58■□□□□ 0.24
LINC01238-205ENST00000567549 CNOT4O95628 575 aaKnown RBP16.58■□□□□ 0.24
LINC01238-205ENST00000567549 CD3EP07766 207 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 PRKCAP17252 672 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 PGCP20142 388 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 LOXP28300 417 aaPredicted RBP16.58■□□□□ 0.24
LINC01238-205ENST00000567549 ATP5J2P56134 94 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 CSNK2A1P68400 391 aaPredicted RBP16.58■□□□□ 0.24
LINC01238-205ENST00000567549 EMX2Q04743 252 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 ITGADQ13349 1161 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 SLC25A53Q5H9E4 307 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 SFRP5Q5T4F7 317 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 TFAP2EQ6VUC0 442 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 C16orf62Q7Z3J2 963 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 GPR119Q8TDV5 335 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 ABHD3Q8WU67 409 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 ROBO4Q8WZ75 1007 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 FBXW5Q969U6 566 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 ZHX1-C8orf76Q96EF9 292 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 OR7D2Q96RA2 312 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 SMR3AQ99954 134 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 TMEM204Q9BSN7 226 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 MECRQ9BV79 373 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 CXorf36Q9H7Y0 433 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 POLE3Q9NRF9 147 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 ZNF701Q9NV72 531 aaPredicted RBP16.58■□□□□ 0.24
LINC01238-205ENST00000567549 FAIMQ9NVQ4 179 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 GPATCH2Q9NW75 528 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 ASIC5Q9NY37 505 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 EMC3Q9P0I2 261 aa16.58■□□□□ 0.24
LINC01238-205ENST00000567549 RNASET2O00584 256 aaKnown RBP16.57■□□□□ 0.24
LINC01238-205ENST00000567549 ANKRD28O15084 1053 aa16.57■□□□□ 0.24
LINC01238-205ENST00000567549 RGS16O15492 202 aaPredicted RBP16.57■□□□□ 0.24
LINC01238-205ENST00000567549 LY6G6DO95868 133 aa16.57■□□□□ 0.24
LINC01238-205ENST00000567549 MATN1P21941 496 aa16.57■□□□□ 0.24
LINC01238-205ENST00000567549 ENPP1P22413 925 aa16.57■□□□□ 0.24
LINC01238-205ENST00000567549 CLDN8P56748 225 aa16.57■□□□□ 0.24
LINC01238-205ENST00000567549 CAPRIN1Q14444 709 aaKnown RBP16.57■□□□□ 0.24
LINC01238-205ENST00000567549 DPY19L1Q2PZI1 675 aa16.57■□□□□ 0.24
LINC01238-205ENST00000567549 PGS1Q32NB8 556 aa16.57■□□□□ 0.24
LINC01238-205ENST00000567549 ANXA8L1Q5VT79 327 aa16.57■□□□□ 0.24
LINC01238-205ENST00000567549 ZCCHC23Q6ZST2 131 aa16.57■□□□□ 0.24
LINC01238-205ENST00000567549 Q71RC1 249 aaPredicted RBP16.57■□□□□ 0.24
LINC01238-205ENST00000567549 EIF3MQ7L2H7 374 aaKnown RBP16.57■□□□□ 0.24
LINC01238-205ENST00000567549 NUDCD3Q8IVD9 361 aa16.57■□□□□ 0.24
LINC01238-205ENST00000567549 TUSC5Q8IXB3 177 aa16.57■□□□□ 0.24
LINC01238-205ENST00000567549 GABRG1Q8N1C3 465 aa16.57■□□□□ 0.24
LINC01238-205ENST00000567549 RFWD2Q8NHY2 731 aa16.57■□□□□ 0.24
LINC01238-205ENST00000567549 AKAP1Q92667 903 aaKnown RBP eCLIP16.57■□□□□ 0.24
LINC01238-205ENST00000567549 S100PBPQ96BU1 408 aa16.57■□□□□ 0.24
LINC01238-205ENST00000567549 MUCL1Q96DR8 90 aa16.57■□□□□ 0.24
LINC01238-205ENST00000567549 CENPHQ9H3R5 247 aa16.57■□□□□ 0.24
LINC01238-205ENST00000567549 SLC17A7Q9P2U7 560 aa16.57■□□□□ 0.24
LINC01238-205ENST00000567549 NUP214P35658 2090 aaPredicted RBP16.57■□□□□ 0.24
LINC01238-205ENST00000567549 SERINC4A6NH21 518 aa16.56■□□□□ 0.24
LINC01238-205ENST00000567549 SMAD7O15105 426 aaKnown RBP16.56■□□□□ 0.24
LINC01238-205ENST00000567549 SPAG7O75391 227 aa16.56■□□□□ 0.24
LINC01238-205ENST00000567549 CSTAP01040 98 aa16.56■□□□□ 0.24
LINC01238-205ENST00000567549 BPGMP07738 259 aa16.56■□□□□ 0.24
LINC01238-205ENST00000567549 ANXA11P50995 505 aaKnown RBP16.56■□□□□ 0.24
LINC01238-205ENST00000567549 HPCAP84074 193 aa16.56■□□□□ 0.24
LINC01238-205ENST00000567549 QPRTQ15274 297 aa16.56■□□□□ 0.24
LINC01238-205ENST00000567549 CBLN3Q6UW01 205 aa16.56■□□□□ 0.24
LINC01238-205ENST00000567549 Q6ZT83 130 aa16.56■□□□□ 0.24
LINC01238-205ENST00000567549 P2RY8Q86VZ1 359 aa16.56■□□□□ 0.24
LINC01238-205ENST00000567549 RIMKLAQ8IXN7 391 aa16.56■□□□□ 0.24
LINC01238-205ENST00000567549 ATP6V1C2Q8NEY4 427 aa16.56■□□□□ 0.24
LINC01238-205ENST00000567549 SLC35G5Q96KT7 338 aa16.56■□□□□ 0.24
LINC01238-205ENST00000567549 SDF2Q99470 211 aa16.56■□□□□ 0.24
LINC01238-205ENST00000567549 LAT2Q9GZY6 243 aa16.56■□□□□ 0.24
LINC01238-205ENST00000567549 ALG2Q9H553 416 aa16.56■□□□□ 0.24
LINC01238-205ENST00000567549 BCO1Q9HAY6 547 aa16.56■□□□□ 0.24
LINC01238-205ENST00000567549 SLC35A3Q9Y2D2 325 aa16.56■□□□□ 0.24
LINC01238-205ENST00000567549 NPIPB9F8W1W9 429 aa16.55■□□□□ 0.24
LINC01238-205ENST00000567549 ETV2O00321 342 aaPredicted RBP16.55■□□□□ 0.24
LINC01238-205ENST00000567549 POLR3GO15318 223 aaPredicted RBP16.55■□□□□ 0.24
LINC01238-205ENST00000567549 GCM2O75603 506 aaPredicted RBP16.55■□□□□ 0.24
LINC01238-205ENST00000567549 GUSBP08236 651 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms