RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 RMND5AQ9H871 391 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 HHATLQ9HCP6 504 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 SLC52A3Q9NQ40 469 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 EXD2Q9NVH0 621 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 CCDC167Q9P0B6 97 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 ZNF175Q9Y473 711 aa12.24□□□□□ -0.45
VPS9D1-204ENST00000565023 A0A0J9YW62 118 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 DUXAA6NLW8 204 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 A8MXE2 369 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 RFXANKO14593 260 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 FCMRO60667 390 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 STX11O75558 287 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 LINGO3P0C6S8 592 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 ZCCHC18P0CG32 403 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 UBL4AP11441 157 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 NCF2P19878 526 aaPredicted RBP12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 KIR2DL2P43627 348 aaPredicted RBP12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 KHKP50053 298 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 ARFIP2P53365 341 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 RAC1P63000 192 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 FAM27E3Q08E93 113 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 EXOC3L2Q2M3D2 409 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 GPAT3Q53EU6 434 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 AGKQ53H12 422 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 ATAD3BQ5T9A4 648 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 HBMQ6B0K9 141 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 ZNF621Q6ZSS3 439 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 MTERF4Q7Z6M4 381 aaKnown RBP12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 TRIML2Q8N7C3 387 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 CHDHQ8NE62 594 aaPredicted RBP12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 OR2V1Q8NHB1 315 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 PNPT1Q8TCS8 783 aaKnown RBP12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 ROBO4Q8WZ75 1007 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 GTF2H4Q92759 462 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 SPDL1Q96EA4 605 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 ITCHQ96J02 903 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 RASSF1Q9NS23 344 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 KLHL14Q9P2G3 628 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 MCTS1Q9ULC4 181 aaKnown RBP12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 PROCRQ9UNN8 238 aa12.23□□□□□ -0.45
VPS9D1-204ENST00000565023 CCDC168Q8NDH2 2452 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 SPG11Q96JI7 2443 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 SERINC4A6NH21 518 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 NPIPB9F8W1W9 429 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 MSTNO14793 375 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 ZNF264O43296 627 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 AK1P00568 194 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 CSTAP01040 98 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 CRHP06850 196 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 UBTFL6P0CB48 400 aaPredicted RBP12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 EPXP11678 715 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 CD1EP15812 388 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 PSMA4P25789 261 aaKnown RBP12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 DNAJA1P31689 397 aaKnown RBP12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 CTBP2P56545 445 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 SORDQ00796 357 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 CTU2Q2VPK5 515 aaKnown RBP12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 ARHGAP11BQ3KRB8 267 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 PDSS1Q5T2R2 415 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 LSRQ86X29 649 aaPredicted RBP12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 RNF130Q86XS8 419 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 CDC20BQ86Y33 519 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 LILRA2Q8N149 483 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 ZNF610Q8N9Z0 462 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 GPR119Q8TDV5 335 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 ROPN1LQ96C74 230 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 ZC3HAV1LQ96H79 300 aaKnown RBP12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 KLHL15Q96M94 604 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 THUMPD3Q9BV44 507 aaKnown RBP12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 QRSL1Q9H0R6 528 aaKnown RBP12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 RNF122Q9H9V4 155 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 SLC6A13Q9NSD5 602 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 KCNE5Q9UJ90 142 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 ICAM5Q9UMF0 924 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 PLEKHA6Q9Y2H5 1048 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 WDR45Q9Y484 360 aa12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 ANKHD1Q8IWZ3 2542 aaKnown RBP12.22□□□□□ -0.45
VPS9D1-204ENST00000565023 A0A1W2PP18 115 aa12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 SH3D21A4FU49 640 aa12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 NR5A2O00482 541 aa12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 CASKO14936 926 aa12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 EFNA2O43921 213 aa12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 UGT2B17O75795 530 aa12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 AGR2O95994 175 aa12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 FCGR2AP12318 317 aa12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 POU2F1P14859 743 aa12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 PRKCAP17252 672 aa12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 HOXB9P17482 250 aaPredicted RBP12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 ART1P52961 327 aa12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 IST1P53990 364 aa12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 GYS2P54840 703 aa12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 EEF1A1P68104 462 aaKnown RBP12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 HPCAP84074 193 aa12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 QPRTQ15274 297 aa12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 MAPK14Q16539 360 aa12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 TMEM176BQ3YBM2 270 aaPredicted RBP12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 EEF1A1P5Q5VTE0 462 aa12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 ANKRD34AQ69YU3 496 aa12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 HEPHL1Q6MZM0 1159 aa12.21□□□□□ -0.45
VPS9D1-204ENST00000565023 SLC2A7Q6PXP3 512 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms