RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 A0A1B0GTQ1 180 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 C2orf92A0A1B0GVN3 265 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 MACROD2A1Z1Q3 448 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 MIF4GDA9UHW6 222 aaKnown RBP4.21□□□□□ -1.74
LINC00254-201ENST00000563416 APOC4-APOC2K7ER74 178 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 KCNK1O00180 336 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 RAD51BO15315 384 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 SSX5O60225 188 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 DFNA5O60443 496 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 CST8O60676 142 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 MAGEC1O60732 1142 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 PEX11AO75192 247 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 TM7SF2O76062 418 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 IFNB1P01574 187 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 APOC2P02655 101 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 CD59P13987 128 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 ETS1P14921 441 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 RPS2P15880 293 aaKnown RBP4.21□□□□□ -1.74
LINC00254-201ENST00000563416 CSRP1P21291 193 aaKnown RBP4.21□□□□□ -1.74
LINC00254-201ENST00000563416 MAT2AP31153 395 aaKnown RBP4.21□□□□□ -1.74
LINC00254-201ENST00000563416 AKT2P31751 481 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 MNDAP41218 407 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 CDX1P47902 265 aaPredicted RBP4.21□□□□□ -1.74
LINC00254-201ENST00000563416 CSNK1EP49674 416 aaKnown RBP4.21□□□□□ -1.74
LINC00254-201ENST00000563416 RWDD2BP57060 319 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 RPL26P61254 145 aaKnown RBP4.21□□□□□ -1.74
LINC00254-201ENST00000563416 BCL2L1Q07817 233 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 XRCC4Q13426 336 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 ODF4Q2M2E3 257 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 HLA-BQ31612 363 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 FASTKD1Q53R41 847 aaKnown RBP4.21□□□□□ -1.74
LINC00254-201ENST00000563416 CYB5D1Q6P9G0 228 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 Q6ZSR9 355 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 BZW1Q7L1Q6 419 aaKnown RBP4.21□□□□□ -1.74
LINC00254-201ENST00000563416 KRTAP7-1Q8IUC3 87 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 CCDC50Q8IVM0 306 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 AQP12AQ8IXF9 295 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 SLC22A18ASQ8N1D0 253 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 NPEPL1Q8NDH3 523 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 VANGL1Q8TAA9 524 aaPredicted RBP4.21□□□□□ -1.74
LINC00254-201ENST00000563416 P3H4Q92791 437 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 SGF29Q96ES7 293 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 C14orf79Q96F83 325 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 RBM18Q96H35 190 aaKnown RBP4.21□□□□□ -1.74
LINC00254-201ENST00000563416 SERAC1Q96JX3 654 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 PRAC1Q96KF2 57 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 POM121L2Q96KW2 1035 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 BMFQ96LC9 184 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 SAMD8Q96LT4 415 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 NSMCE2Q96MF7 247 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 QKIQ96PU8 341 aaKnown RBP eCLIP4.21□□□□□ -1.74
LINC00254-201ENST00000563416 MCCC1Q96RQ3 725 aaPredicted RBP4.21□□□□□ -1.74
LINC00254-201ENST00000563416 LYSMD1Q96S90 227 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 TDRD1Q9BXT4 1180 aaKnown RBP4.21□□□□□ -1.74
LINC00254-201ENST00000563416 TSGA10Q9BZW7 698 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 TSPYL1Q9H0U9 437 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 NT5MQ9NPB1 228 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 PLCXD1Q9NUJ7 323 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 RBM22Q9NW64 420 aaKnown RBP eCLIP4.21□□□□□ -1.74
LINC00254-201ENST00000563416 DCAF16Q9NXF7 216 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 EXTL2Q9UBQ6 330 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 UBQLN2Q9UHD9 624 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 RPL26L1Q9UNX3 145 aaKnown RBP4.21□□□□□ -1.74
LINC00254-201ENST00000563416 KCNK6Q9Y257 313 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 HEY1Q9Y5J3 304 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 RNF215Q9Y6U7 377 aa4.21□□□□□ -1.74
LINC00254-201ENST00000563416 FREM2Q5SZK8 3169 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 A0A0J9YYE9 177 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 SPTY2D1-AS1A0A0U1RR47 76 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 IGLON5A6NGN9 336 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 HACD1B0YJ81 288 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 TLR4O00206 839 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 PSMD11O00231 422 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 FPGTO14772 594 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 SLC31A1O15431 190 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 YKT6O15498 198 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 NME6O75414 186 aaPredicted RBP4.2□□□□□ -1.74
LINC00254-201ENST00000563416 ZNF189O75820 626 aaPredicted RBP4.2□□□□□ -1.74
LINC00254-201ENST00000563416 TGFAP01135 160 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 JCHAINP01591 159 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 TRBC1P01850 177 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 IGHV4-31P0DP07 118 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 LHCGRP22888 699 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 PTGER4P35408 488 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 RPL21P46778 160 aaKnown RBP4.2□□□□□ -1.74
LINC00254-201ENST00000563416 SLC6A12P48065 614 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 MAZP56270 477 aaKnown RBP4.2□□□□□ -1.74
LINC00254-201ENST00000563416 C21orf59P57076 290 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 PFN3P60673 137 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 DYNLT1P63172 113 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 OTUD4Q01804 1114 aaKnown RBP4.2□□□□□ -1.74
LINC00254-201ENST00000563416 LRRC74AQ0VAA2 488 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 CTU2Q2VPK5 515 aaKnown RBP4.2□□□□□ -1.74
LINC00254-201ENST00000563416 PDLIM3Q53GG5 364 aaPredicted RBP4.2□□□□□ -1.74
LINC00254-201ENST00000563416 TEX44Q53QW1 395 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 TPRG1LQ5T0D9 272 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 ARMC12Q5T9G4 340 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 KDELC1Q6UW63 502 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 PEX26Q7Z412 305 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 AMIGO1Q86WK6 493 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 699.9 ms