RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 ZNF689Q96CS4 500 aaPredicted RBP15.32■□□□□ 0.04
TPM1-228ENST00000560975 SLC41A3Q96GZ6 507 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 CPEB1Q9BZB8 566 aaKnown RBP15.32■□□□□ 0.04
TPM1-228ENST00000560975 OR52D1Q9H346 318 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 CCDC86Q9H6F5 360 aaKnown RBP15.32■□□□□ 0.04
TPM1-228ENST00000560975 BCL2L10Q9HD36 194 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 NFKBIL1Q9UBC1 381 aaPredicted RBP15.32■□□□□ 0.04
TPM1-228ENST00000560975 FBXL4Q9UKA2 621 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 ASF1AQ9Y294 204 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 PCDHGA9Q9Y5G4 932 aaKnown RBP15.32■□□□□ 0.04
TPM1-228ENST00000560975 PCDHGA5Q9Y5G8 931 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 TP53BP1Q12888 1972 aaPredicted RBP15.32■□□□□ 0.04
TPM1-228ENST00000560975 D6RAR5 112 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 H7BY64 318 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 CREBL2O60519 120 aaPredicted RBP15.31■□□□□ 0.04
TPM1-228ENST00000560975 LEFTY1O75610 366 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 HOXB3P14651 431 aaPredicted RBP15.31■□□□□ 0.04
TPM1-228ENST00000560975 GABRA1P14867 456 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 FRKP42685 505 aaPredicted RBP15.31■□□□□ 0.04
TPM1-228ENST00000560975 EIF2B5Q13144 721 aaKnown RBP15.31■□□□□ 0.04
TPM1-228ENST00000560975 TP53I3Q53FA7 332 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 ARSIQ5FYB1 569 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 FAM69AQ5T7M9 428 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 C18orf63Q68DL7 685 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 HEPHL1Q6MZM0 1159 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 GSG1LQ6UXU4 331 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 SSX6Q7RTT6 188 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 UBE2Q1Q7Z7E8 422 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 FAM129CQ86XR2 697 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 FAM71CQ8NEG0 241 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 OR5M1Q8NGP8 315 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 PRAP1Q96NZ9 151 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 MACROD1Q9BQ69 325 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 EMC3Q9P0I2 261 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 ABRACLQ9P1F3 81 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 SLC7A7Q9UM01 511 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 A0A0G2JPF8 293 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 HNRNPCL3B7ZW38 293 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 GSTZ1O43708 216 aaPredicted RBP15.31■□□□□ 0.04
TPM1-228ENST00000560975 OR5F1O95221 314 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 HNRNPCL4P0DMR1 293 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 SAGP10523 405 aaPredicted RBP15.31■□□□□ 0.04
TPM1-228ENST00000560975 NOS3P29474 1203 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 CLDN12P56749 244 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 C6orf132Q5T0Z8 1188 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 PRPF38BQ5VTL8 546 aaKnown RBP15.31■□□□□ 0.04
TPM1-228ENST00000560975 ASTLQ6HA08 431 aaPredicted RBP15.31■□□□□ 0.04
TPM1-228ENST00000560975 NUDT13Q86X67 352 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 FAM98AQ8NCA5 519 aaKnown RBP15.31■□□□□ 0.04
TPM1-228ENST00000560975 OR5AR1Q8NGP9 310 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 PPP1R16AQ96I34 528 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 JAM3Q9BX67 310 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 SLC6A17Q9H1V8 727 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 SCPEP1Q9HB40 452 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 POLMQ9NP87 494 aaPredicted RBP15.31■□□□□ 0.04
TPM1-228ENST00000560975 SLC6A20Q9NP91 592 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 SLC25A13Q9UJS0 675 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 LRFN2Q9ULH4 789 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 HS3ST2Q9Y278 367 aa15.31■□□□□ 0.04
TPM1-228ENST00000560975 OR2M5A3KFT3 312 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 FMO6PO60774 539 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 LATS1O95835 1130 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 IFNGR1P15260 489 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 PPP3CBP16298 524 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 GPNMBQ14956 572 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 AGERQ15109 404 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 MAPK14Q16539 360 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 C2orf68Q2NKX9 166 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 HSD17B13Q7Z5P4 300 aaPredicted RBP15.3■□□□□ 0.04
TPM1-228ENST00000560975 HDDC3Q8N4P3 179 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 SLAIN1Q8ND83 568 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 KISS1RQ969F8 398 aaPredicted RBP15.3■□□□□ 0.04
TPM1-228ENST00000560975 ELP4Q96EB1 424 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 ARSGQ96EG1 525 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 NARS2Q96I59 477 aaKnown RBP15.3■□□□□ 0.04
TPM1-228ENST00000560975 FRMPD3Q5JV73 1810 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 FCMRO60667 390 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 ADAMTS4O75173 837 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 STX11O75558 287 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 DCTDP32321 178 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 RECQLP46063 649 aaPredicted RBP15.3■□□□□ 0.04
TPM1-228ENST00000560975 FNTBP49356 437 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 ZNF85Q03923 595 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 DUSP2Q05923 314 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 C17orf64Q86WR6 236 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 SPICQ8N5J4 248 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 OR2A12Q8NGT7 310 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 FANK1Q8TC84 345 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 LCORQ96JN0 433 aaPredicted RBP15.3■□□□□ 0.04
TPM1-228ENST00000560975 OR14A2Q96R54 314 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 SEMA4CQ9C0C4 833 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 SLC38A1Q9H2H9 487 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 ANKRD19PQ9H560 264 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 SLC35C2Q9NQQ7 365 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 ACSS1Q9NUB1 689 aaPredicted RBP15.3■□□□□ 0.04
TPM1-228ENST00000560975 OR6C65A6NJZ3 312 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 SELENOFO60613 162 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 PTP4A3O75365 173 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 SC5DO75845 299 aa15.3■□□□□ 0.04
TPM1-228ENST00000560975 HIST1H2ABP04908 130 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms