RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 H7BY64 318 aa13.08□□□□□ -0.32
CSPG4P12-202ENST00000559989 TGFB1I1O43294 461 aa13.08□□□□□ -0.32
CSPG4P12-202ENST00000559989 AHSGP02765 367 aa13.08□□□□□ -0.32
CSPG4P12-202ENST00000559989 CAPNS1P04632 268 aa13.08□□□□□ -0.32
CSPG4P12-202ENST00000559989 PROZP22891 400 aa13.08□□□□□ -0.32
CSPG4P12-202ENST00000559989 ATP1B3P54709 279 aa13.08□□□□□ -0.32
CSPG4P12-202ENST00000559989 PTPRCAPQ14761 206 aa13.08□□□□□ -0.32
CSPG4P12-202ENST00000559989 EBPQ15125 230 aaKnown RBP13.08□□□□□ -0.32
CSPG4P12-202ENST00000559989 TESK1Q15569 626 aa13.08□□□□□ -0.32
CSPG4P12-202ENST00000559989 APOOLQ6UXV4 268 aa13.08□□□□□ -0.32
CSPG4P12-202ENST00000559989 FAM217AQ8IXS0 508 aa13.08□□□□□ -0.32
CSPG4P12-202ENST00000559989 KRTCAP2Q8N6L1 136 aa13.08□□□□□ -0.32
CSPG4P12-202ENST00000559989 LFNGQ8NES3 379 aa13.08□□□□□ -0.32
CSPG4P12-202ENST00000559989 BPIFCQ8NFQ6 507 aa13.08□□□□□ -0.32
CSPG4P12-202ENST00000559989 PRAP1Q96NZ9 151 aa13.08□□□□□ -0.32
CSPG4P12-202ENST00000559989 NDFIP1Q9BT67 221 aa13.08□□□□□ -0.32
CSPG4P12-202ENST00000559989 NPAP1Q9NZP6 1156 aa13.08□□□□□ -0.32
CSPG4P12-202ENST00000559989 SPATA31A1Q5TZJ5 1347 aa13.08□□□□□ -0.32
CSPG4P12-202ENST00000559989 USP32Q8NFA0 1604 aa13.08□□□□□ -0.32
CSPG4P12-202ENST00000559989 A0A0B4J2A0 478 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 KRBA1A5PL33 1030 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 ANKUB1A6NFN9 424 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 KIAA1324LA8MWY0 1029 aaPredicted RBP13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 SPP1P10451 314 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 KCNE1P15382 129 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 MRPL19P49406 292 aaKnown RBP13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 OR11L1Q8NGX0 322 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 OR5B3Q8NH48 314 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 FCRL1Q96LA6 429 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 ALG12Q9BV10 488 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 SGPP1Q9BX95 441 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 OR51B6Q9H340 312 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 SHPKQ9UHJ6 478 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 A0A1W2PRU2 124 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 NCBP2LA6PVI3 153 aaKnown RBP13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 DDNO94850 711 aaPredicted RBP13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 CLDN1O95832 211 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 EGFP01133 1207 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 CBR1P16152 277 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 CATSPEREQ5SY80 951 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 SLC2A13Q96QE2 648 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 MCTS1Q9ULC4 181 aaKnown RBP13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 GPR34Q9UPC5 381 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 PCDHA9Q9Y5H5 950 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 DLC1Q96QB1 1528 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 EIF3FO00303 357 aaPredicted RBP13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 RBMS2Q15434 407 aaKnown RBP13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 OR52E8Q6IFG1 317 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 ABHD15Q6UXT9 468 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 OR7G3Q8NG95 312 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 POM121CA8CG34 1229 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 XRCC3O43542 346 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 TGFBR3Q03167 851 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 IL17AQ16552 155 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 PROX2Q3B8N5 592 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 TMEM244Q5VVB8 128 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 ILDR1Q86SU0 546 aaPredicted RBP13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 YIPF5Q969M3 257 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 LIN7BQ9HAP6 207 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 OBP2BQ9NPH6 170 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 CREBZFQ9NS37 354 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 PPP5D1E7EU14 171 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 SOCS5O75159 536 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 HTR3AP46098 478 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 DMWDQ09019 674 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 POLHQ9Y253 713 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 SUSD5O60279 629 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 UGDHO60701 494 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 MPC1LP0DKB6 136 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 CT45A10P0DMU9 189 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 UBE2G1P62253 170 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 CXCL9Q07325 125 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 CAMK2BQ13554 666 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 MICAQ29983 383 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 KCNRGQ8N5I3 272 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 PIGVQ9NUD9 493 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 GPR52Q9Y2T5 361 aa13.07□□□□□ -0.32
CSPG4P12-202ENST00000559989 CXorf49A8MYA2 514 aaPredicted RBP13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 SMIM17P0DL12 118 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 OTX2P32243 289 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 RAB13P51153 203 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 SLC7A9P82251 487 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 TAGLNQ01995 201 aaKnown RBP13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 P2RY14Q15391 338 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 NCBP2-AS2Q69YL0 99 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 Q6ZVU0 165 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 MOB3CQ70IA8 216 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 ANKRD19PQ9H560 264 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 TAS2R38P59533 333 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 GLYR1Q49A26 553 aaPredicted RBP13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 CD300LGQ6UXG3 332 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 CSNK1A1LQ8N752 337 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 FRMD1Q8N878 549 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 C1orf127Q8N9H9 656 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 LILRB4Q8NHJ6 448 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 BLNKQ8WV28 456 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 INTS14Q96SY0 518 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 SCPEP1Q9HB40 452 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 DYNLRB1Q9NP97 96 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 NGBQ9NPG2 151 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms