RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 IGHV4-39P01824 125 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 FGF4P08620 206 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 BCKDHAP12694 445 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 OR3A2P47893 321 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 DSCR9P59020 149 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 RPL38P63173 70 aaKnown RBP8.13□□□□□ -1.11
HDDC3-204ENST00000559834 TP53BP2Q13625 1128 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 CBFBQ13951 182 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 PPA1Q15181 289 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 STK11Q15831 433 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 PGGHGQ32M88 737 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 CHRFAM7AQ494W8 412 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 SPDYE7PQ495Y7 208 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 GALNTL6Q49A17 601 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 ARL13AQ5H913 290 aaPredicted RBP8.13□□□□□ -1.11
HDDC3-204ENST00000559834 TIMM23BQ5SRD1 257 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 DCST2Q5T1A1 773 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 DDIASQ8IXT1 998 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 ZNF100Q8IYN0 542 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 DEPDC4Q8N2C3 294 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 ZNF614Q8N883 585 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 KBTBD8Q8NFY9 601 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 OR2T11Q8NH01 316 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 CLHC1Q8NHS4 586 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 MZB1Q8WU39 189 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 OR5P2Q8WZ92 322 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 NEUROG1Q92886 237 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 MOAP1Q96BY2 351 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 TRIM44Q96DX7 344 aaPredicted RBP8.13□□□□□ -1.11
HDDC3-204ENST00000559834 OTUB1Q96FW1 271 aaPredicted RBP8.13□□□□□ -1.11
HDDC3-204ENST00000559834 PPP3R2Q96LZ3 170 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 TRAF4Q9BUZ4 470 aaPredicted RBP8.13□□□□□ -1.11
HDDC3-204ENST00000559834 EML4Q9HC35 981 aaKnown RBP8.13□□□□□ -1.11
HDDC3-204ENST00000559834 MGAT4BQ9UQ53 548 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 DNAJC15Q9Y5T4 150 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 PTGDR2Q9Y5Y4 395 aa8.13□□□□□ -1.11
HDDC3-204ENST00000559834 DUXAA6NLW8 204 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 SCAMP2O15127 329 aaKnown RBP8.12□□□□□ -1.11
HDDC3-204ENST00000559834 SSX4O60224 188 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 CYTIPO60759 359 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 LYPLA1O75608 230 aaPredicted RBP8.12□□□□□ -1.11
HDDC3-204ENST00000559834 LYZL6O75951 148 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 THBS1P07996 1170 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 LAMP1P11279 417 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 KRT4P19013 534 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 GGT1P19440 569 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 EFNA1P20827 205 aaPredicted RBP8.12□□□□□ -1.11
HDDC3-204ENST00000559834 CSNK2A1P68400 391 aaPredicted RBP8.12□□□□□ -1.11
HDDC3-204ENST00000559834 QPRTQ15274 297 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 RAB35Q15286 201 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 TOMM34Q15785 309 aaPredicted RBP8.12□□□□□ -1.11
HDDC3-204ENST00000559834 SLC25A53Q5H9E4 307 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 KANK2Q63ZY3 851 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 KLHL17Q6TDP4 642 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 TMEM108Q6UXF1 575 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 DNM1P46Q6ZS02 220 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 GALNT5Q7Z7M9 940 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 DTX2Q86UW9 622 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 C10orf107Q8IVU9 208 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 TMCO5AQ8N6Q1 288 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 OR7A2PQ8NGA2 310 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 OR2W6PQ8NHA6 318 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 RFWD2Q8NHY2 731 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 PSMA8Q8TAA3 256 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 TMEM234Q8WY98 164 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 OR5B2Q96R09 309 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 KLHDC3Q9BQ90 382 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 PSD2Q9BQI7 771 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 GATA5Q9BWX5 397 aaPredicted RBP8.12□□□□□ -1.11
HDDC3-204ENST00000559834 TXLNGYQ9BZA5 131 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 TUBB1Q9H4B7 451 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 CXorf36Q9H7Y0 433 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 COQ10BQ9H8M1 238 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 SIRT3Q9NTG7 399 aaPredicted RBP8.12□□□□□ -1.11
HDDC3-204ENST00000559834 EMC3Q9P0I2 261 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 B3GALT5Q9Y2C3 310 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 TRAF6Q9Y4K3 522 aa8.12□□□□□ -1.11
HDDC3-204ENST00000559834 IGHV3-15A0A0B4J1V0 119 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 NPIPA5A0A0B4J1W7 369 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 A0A1W2PNR3 127 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 CIB4A0PJX0 185 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 SERINC4A6NH21 518 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 OR5H1A6NKK0 313 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 SHISA9B4DS77 424 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 C9JVG2 144 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 NPIPA7E9PJI5 369 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 NPIPB9F8W1W9 429 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 SULT2B1O00204 365 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 ABCD4O14678 606 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 CFLARO15519 480 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 OIP5O43482 229 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 RAMP1O60894 148 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 CYP7B1O75881 506 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 PGM3O95394 542 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 AK1P00568 194 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 CD8AP01732 235 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 FAM153BP0C7A2 387 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 NPIPA8P0DM63 369 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 UBL4AP11441 157 aa8.11□□□□□ -1.11
HDDC3-204ENST00000559834 BMP4P12644 408 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms