RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 TRAV17A0A0B4J275 112 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 A0A1B0GTH9 108 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 GXYLT2A0PJZ3 443 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 C19orf84I3L1E1 186 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 SYT5O00445 386 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 AZIN1O14977 448 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 PCDH7O60245 1069 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 NME2P1O60361 137 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 ZG16O60844 167 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 PEX11AO75192 247 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 SEC22BO75396 215 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 SLC25A12O75746 678 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 LDLRP01130 860 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 IGKV1D-16P01601 117 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 UQCRHP07919 91 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 ABCB1P08183 1280 aaPredicted RBP3.86□□□□□ -1.79
SPG11-211ENST00000558561 FGF4P08620 206 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 ANXA4P09525 319 aaPredicted RBP3.86□□□□□ -1.79
SPG11-211ENST00000558561 DHRS4L1P0CG22 281 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 SLC35E2P0CK97 266 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 UROSP10746 265 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 PORP16435 677 aaPredicted RBP3.86□□□□□ -1.79
SPG11-211ENST00000558561 CNR1P21554 472 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 PIK3R1P27986 724 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 TIA1P31483 386 aaKnown RBP eCLIP3.86□□□□□ -1.79
SPG11-211ENST00000558561 CYB561P49447 251 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 SSR4P51571 173 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 MAPK12P53778 367 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 CASP9P55211 416 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 ADORA2A-AS1P86434 159 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 TGM3Q08188 693 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 IFFO1Q0D2I5 559 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 FUT7Q11130 342 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 FOXO1Q12778 655 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 SF3A3Q12874 501 aaKnown RBP eCLIP3.86□□□□□ -1.79
SPG11-211ENST00000558561 ILF2Q12905 390 aaKnown RBP3.86□□□□□ -1.79
SPG11-211ENST00000558561 LCP2Q13094 533 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 BLMHQ13867 455 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 SNTB1Q13884 538 aaKnown RBP3.86□□□□□ -1.79
SPG11-211ENST00000558561 KRT72Q14CN4 511 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 EBPQ15125 230 aaKnown RBP3.86□□□□□ -1.79
SPG11-211ENST00000558561 RASA2Q15283 850 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 CHI3L2Q15782 390 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 ZNF791Q3KP31 576 aaPredicted RBP3.86□□□□□ -1.79
SPG11-211ENST00000558561 CCDC153Q494R4 210 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 GALNTL6Q49A17 601 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 C4orf46Q504U0 113 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 ZNF628Q5EBL2 1059 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 CMPK2Q5EBM0 449 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 IRAK1BP1Q5VVH5 260 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 LIPMQ5VYY2 423 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 OR5M10Q6IEU7 315 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 NOXRED1Q6NXP6 359 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 METTL2BQ6P1Q9 378 aaKnown RBP3.86□□□□□ -1.79
SPG11-211ENST00000558561 EMBQ6PCB8 327 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 GFRALQ6UXV0 394 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 APOOLQ6UXV4 268 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 NPSR1Q6W5P4 371 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 HSDL2Q6YN16 418 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 TAOK1Q7L7X3 1001 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 CCDC91Q7Z6B0 441 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 NUDT13Q86X67 352 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 DOLPP1Q86YN1 238 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 TICAM1Q8IUC6 712 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 NUDCD3Q8IVD9 361 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 SLC22A9Q8IVM8 553 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 ST13P4Q8IZP2 240 aaPredicted RBP3.86□□□□□ -1.79
SPG11-211ENST00000558561 MARVELD2Q8N4S9 558 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 TMEM156Q8N614 296 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 TMEM251Q8N6I4 163 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 ZNF781Q8N8C0 355 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 ANKRD42Q8N9B4 389 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 MORN4Q8NDC4 146 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 SRFBP1Q8NEF9 429 aaKnown RBP3.86□□□□□ -1.79
SPG11-211ENST00000558561 MYRIPQ8NFW9 859 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 OR7A2PQ8NGA2 310 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 OR10G3Q8NGC4 313 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 OR52R1Q8NGF1 315 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 OR52L2PQ8NGH6 319 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 OR5M9Q8NGP3 310 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 OR9A2Q8NGT5 310 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 MGARPQ8TDB4 240 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 WDR60Q8WVS4 1066 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 NR4A3Q92570 626 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 NPIPB3Q92617 1050 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 NTNG2Q96CW9 530 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 ARSGQ96EG1 525 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 TEX37Q96LM6 180 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 TSSK3Q96PN8 268 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 GAL3ST4Q96RP7 486 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 PAIP2Q9BPZ3 127 aaKnown RBP3.86□□□□□ -1.79
SPG11-211ENST00000558561 C1orf50Q9BV19 199 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 ELOVL1Q9BW60 279 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 QTRT1Q9BXR0 403 aaKnown RBP3.86□□□□□ -1.79
SPG11-211ENST00000558561 ITPAQ9BY32 194 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 GLIPR2Q9H4G4 154 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 TRIM45Q9H8W5 580 aaPredicted RBP3.86□□□□□ -1.79
SPG11-211ENST00000558561 BRF2Q9HAW0 419 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 TMBIM4Q9HC24 238 aa3.86□□□□□ -1.79
SPG11-211ENST00000558561 SH2D2AQ9NP31 389 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms