RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 DENND4AQ7Z401 1863 aa15.12■□□□□ 0.01
SHMT2-232ENST00000557487 RIIAD1A6NNX1 92 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 DVL2O14641 736 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 GATBO75879 557 aaKnown RBP15.11■□□□□ 0.01
SHMT2-232ENST00000557487 ZIC2O95409 532 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-232ENST00000557487 ASGR2P07307 311 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 ZNF136P52737 540 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 OR10A3P58181 314 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 ZNF750Q32MQ0 723 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 C18orf63Q68DL7 685 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 OVCH1Q7RTY7 1134 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 DEFB123Q8N688 67 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 FAM98AQ8NCA5 519 aaKnown RBP15.11■□□□□ 0.01
SHMT2-232ENST00000557487 OR11H4Q8NGC9 324 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 TMEM239Q8WW34 195 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 NACC2Q96BF6 587 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 ART5Q96L15 291 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 ERMAPQ96PL5 475 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-232ENST00000557487 TIMM29Q9BSF4 260 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 NARFLQ9H6Q4 476 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 DLL4Q9NR61 685 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 C14orf105Q9NVL8 296 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 SPATA2Q9UM82 520 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 TBC1D3EA0A087X179 549 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 FCMRO60667 390 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 ECDO95905 644 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-232ENST00000557487 TGM6O95932 706 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 DBIP07108 87 aaKnown RBP15.11■□□□□ 0.01
SHMT2-232ENST00000557487 C8orf89P0DMQ9 161 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 TBXA2RP21731 343 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 RPS7P62081 194 aaKnown RBP15.11■□□□□ 0.01
SHMT2-232ENST00000557487 FOXK2Q01167 660 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 TAGLNQ01995 201 aaKnown RBP15.11■□□□□ 0.01
SHMT2-232ENST00000557487 SLC3A1Q07837 685 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 SNTB2Q13425 540 aaKnown RBP15.11■□□□□ 0.01
SHMT2-232ENST00000557487 KLF9Q13886 244 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-232ENST00000557487 LRRC25Q8N386 305 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-232ENST00000557487 SMIM4Q8WVI0 70 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 C4orf36Q96KX1 117 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 INSM2Q96T92 566 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-232ENST00000557487 TEX101Q9BY14 249 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 PLEKHA1Q9HB21 404 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 NTNG1Q9Y2I2 539 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 MAB21L2Q9Y586 359 aa15.11■□□□□ 0.01
SHMT2-232ENST00000557487 RPS10-NUDT3A0A1W2PQS6 291 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 LINC01553A4QN01 128 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 C4orf51C9J302 202 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 OGG1O15527 345 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 FLRT2O43155 660 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 PRICKLE3O43900 615 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-232ENST00000557487 NTN1O95631 604 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 PCCBP05166 539 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 ZNF3P17036 446 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 RPS4Y1P22090 263 aaKnown RBP15.1■□□□□ 0.01
SHMT2-232ENST00000557487 CERS1P27544 350 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 SRP9P49458 86 aaKnown RBP15.1■□□□□ 0.01
SHMT2-232ENST00000557487 AP3S2P59780 193 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 AGERQ15109 404 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 LGALSLQ3ZCW2 172 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-232ENST00000557487 CDONQ4KMG0 1287 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 Q7L0L9 218 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 ETFBKMTQ8IXQ9 262 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 SLC38A6Q8IZM9 456 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 SYS1Q8N2H4 156 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 GIMAP1Q8WWP7 306 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 PTP4A1Q93096 173 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 OMA1Q96E52 524 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 NRTNQ99748 197 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 DPH1Q9BZG8 443 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 ADGRL4Q9HBW9 690 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 SLC6A20Q9NP91 592 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 KLHL1Q9NR64 748 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 IL20RAQ9UHF4 553 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 ZMIZ1Q9ULJ6 1067 aa15.1■□□□□ 0.01
SHMT2-232ENST00000557487 TRABD2BA6NFA1 517 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 RNGTTO60942 597 aaKnown RBP15.09■□□□□ 0.01
SHMT2-232ENST00000557487 PEX14O75381 377 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 OR7A10O76100 309 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 EPXP11678 715 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 CXCL3P19876 107 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 SLC2A5P22732 501 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 CMPK1P30085 196 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 P2RY2P41231 377 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 ZNF81P51508 661 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 FXYD6P3P58550 94 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 RAB8AP61006 207 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 ACTA2P62736 377 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 ACTG2P63267 376 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 E2F1Q01094 437 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 ZNF85Q03923 595 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 MLF2Q15773 248 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-232ENST00000557487 SLC25A35Q3KQZ1 300 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 ELFN2Q5R3F8 820 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 MTSS1LQ765P7 747 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 BMP8AQ7Z5Y6 402 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 SLC51BQ86UW2 128 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 COMMD7Q86VX2 200 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 PIAS4Q8N2W9 510 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-232ENST00000557487 OR2L13Q8N349 312 aa15.09■□□□□ 0.01
SHMT2-232ENST00000557487 UXS1Q8NBZ7 420 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms