RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 MRPL19P49406 292 aaKnown RBP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 LTB4RQ15722 352 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 CTRB2Q6GPI1 263 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 AADACL2Q6P093 401 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 OR5M8Q8NGP6 311 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 BLNKQ8WV28 456 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 QRSL1Q9H0R6 528 aaKnown RBP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.35□□□□□ -1.073e-6■■■■□ 26.2
SYNE3-205ENST00000557275 TACR1P25103 407 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 NDUFA6P56556 154 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 RELAQ04206 551 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 AMZ1Q400G9 498 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 STEAP1BQ6NZ63 245 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 BPHLQ86WA6 291 aaPredicted RBP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 OR10K1Q8NGX5 313 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.35□□□□□ -1.07
SYNE3-205ENST00000557275 PRTFDC1Q9NRG1 225 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 SCML1Q9UN30 329 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 SURF4O15260 269 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 DUX1O43812 170 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 FAM155BO75949 473 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 THBS1P07996 1170 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 MS4A4EQ96PG1 132 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 DHRS9Q9BPW9 319 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 SSUH2Q9Y2M2 353 aa8.35□□□□□ -1.07
SYNE3-205ENST00000557275 PRR36Q9H6K5 1346 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 DLX3O60479 287 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 TCTAP57738 103 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 FXYD4P59646 89 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 ZNF154Q13106 437 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 TCTE1Q5JU00 501 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 EEF1DP3Q658K8 133 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 DUSP19Q8WTR2 217 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 INTS12Q96CB8 462 aaKnown RBP8.34□□□□□ -1.07
SYNE3-205ENST00000557275 SAMD8Q96LT4 415 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 TP53BP1Q12888 1972 aaPredicted RBP8.34□□□□□ -1.07
SYNE3-205ENST00000557275 C6orf47O95873 294 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 IGHEP01854 428 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 AADACP22760 399 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 NPRL2Q8WTW4 380 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 KCNG2Q9UJ96 466 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 TECPR2O15040 1411 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 HPGDSO60760 199 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 ACSM1Q08AH1 577 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 PPP2R2DQ66LE6 453 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 IL34Q6ZMJ4 242 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 TMPRSS11FQ6ZWK6 438 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 RHOUQ7L0Q8 258 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 C2orf73Q8N5S3 287 aaPredicted RBP8.34□□□□□ -1.07
SYNE3-205ENST00000557275 LRRN4CLQ8ND94 238 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 TMEM59Q9BXS4 323 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 SLC2A9Q9NRM0 540 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 SPHK1Q9NYA1 384 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 RALYQ9UKM9 306 aaKnown RBP8.34□□□□□ -1.07
SYNE3-205ENST00000557275 TRAPPC2LH3BP13 241 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 FBLP22087 321 aaKnown RBP8.34□□□□□ -1.07
SYNE3-205ENST00000557275 CLDN6P56747 220 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 CDONQ4KMG0 1287 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 REEP6Q96HR9 211 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 ZBTB45Q96K62 511 aaPredicted RBP8.34□□□□□ -1.07
SYNE3-205ENST00000557275 FAM166BA8MTA8 275 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 PLRG1O43660 514 aaKnown RBP8.34□□□□□ -1.07
SYNE3-205ENST00000557275 DPP4P27487 766 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 FCER1GP30273 86 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 RPS13P62277 151 aaKnown RBP8.34□□□□□ -1.07
SYNE3-205ENST00000557275 MKXQ8IYA7 352 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 CPEB3Q8NE35 698 aaKnown RBP8.34□□□□□ -1.07
SYNE3-205ENST00000557275 NUP43Q8NFH3 380 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 DBF4BQ8NFT6 615 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 VAMP8Q9BV40 100 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 COQ3Q9NZJ6 369 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 LMTK2Q8IWU2 1503 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 LRRC30A6NM36 301 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 NAA10P41227 235 aaPredicted RBP8.34□□□□□ -1.07
SYNE3-205ENST00000557275 ADPRHP54922 357 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 SLC7A9P82251 487 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 GLB1L2Q8IW92 636 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 SLC41A2Q96JW4 573 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 ZNF160Q9HCG1 818 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 ZDHHC2Q9UIJ5 367 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 ASGR2P07307 311 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 GALTP07902 379 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 GABRA5P31644 462 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 MEF2AQ02078 507 aaPredicted RBP8.34□□□□□ -1.07
SYNE3-205ENST00000557275 PRAMEF8Q5VWM4 474 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 PRAMEF7Q5VXH5 474 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 MEX3BQ6ZN04 569 aaKnown RBP8.34□□□□□ -1.07
SYNE3-205ENST00000557275 CELF5Q8N6W0 485 aaKnown RBP8.34□□□□□ -1.07
SYNE3-205ENST00000557275 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.34□□□□□ -1.07
SYNE3-205ENST00000557275 ABCC6O95255 1503 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 DEFA4P12838 97 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 RPS21P63220 83 aaKnown RBP8.34□□□□□ -1.07
SYNE3-205ENST00000557275 HBMQ6B0K9 141 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 OR2M7Q8NG81 312 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 MARC2Q969Z3 335 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 NOX3Q9HBY0 568 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 SIRPGQ9P1W8 387 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 TEX264Q9Y6I9 313 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 GRXCR1A8MXD5 290 aa8.34□□□□□ -1.07
SYNE3-205ENST00000557275 M0QZK8 103 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms