RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 GUSBP1Q15486 140 aa9.67□□□□□ -0.86
XRCC3-216ENST00000556682 CTU2Q2VPK5 515 aaKnown RBP9.67□□□□□ -0.86
XRCC3-216ENST00000556682 GPAT3Q53EU6 434 aa9.67□□□□□ -0.86
XRCC3-216ENST00000556682 TMEM201Q5SNT2 666 aa9.67□□□□□ -0.86
XRCC3-216ENST00000556682 SAXO2Q658L1 398 aa9.67□□□□□ -0.86
XRCC3-216ENST00000556682 HEPHL1Q6MZM0 1159 aa9.67□□□□□ -0.86
XRCC3-216ENST00000556682 TNFAIP8L2Q6P589 184 aaPredicted RBP9.67□□□□□ -0.86
XRCC3-216ENST00000556682 ZNF621Q6ZSS3 439 aa9.67□□□□□ -0.86
XRCC3-216ENST00000556682 BEND4Q6ZU67 534 aa9.67□□□□□ -0.86
XRCC3-216ENST00000556682 PIWIL2Q8TC59 973 aaKnown RBP9.67□□□□□ -0.86
XRCC3-216ENST00000556682 ST8SIA1Q92185 356 aa9.67□□□□□ -0.86
XRCC3-216ENST00000556682 ROPN1LQ96C74 230 aa9.67□□□□□ -0.86
XRCC3-216ENST00000556682 WFIKKN1Q96NZ8 548 aa9.67□□□□□ -0.86
XRCC3-216ENST00000556682 THUMPD3Q9BV44 507 aaKnown RBP9.67□□□□□ -0.86
XRCC3-216ENST00000556682 SERHL2Q9H4I8 314 aa9.67□□□□□ -0.86
XRCC3-216ENST00000556682 WDR55Q9H6Y2 383 aaPredicted RBP9.67□□□□□ -0.86
XRCC3-216ENST00000556682 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.67□□□□□ -0.86
XRCC3-216ENST00000556682 CCM2LQ9NUG4 571 aaPredicted RBP9.67□□□□□ -0.86
XRCC3-216ENST00000556682 LIPT1Q9Y234 373 aa9.67□□□□□ -0.86
XRCC3-216ENST00000556682 TESMINQ9Y4I5 508 aa9.67□□□□□ -0.86
XRCC3-216ENST00000556682 GPR45Q9Y5Y3 372 aa9.67□□□□□ -0.86
XRCC3-216ENST00000556682 DOCK7Q96N67 2140 aa9.67□□□□□ -0.86
XRCC3-216ENST00000556682 KIAA1549Q9HCM3 1950 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 PDZD2O15018 2839 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 KLF11O14901 512 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 OIP5O43482 229 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 SLC22A3O75751 556 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 UGT2B17O75795 530 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 RAF1P04049 648 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 HRGP04196 525 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 UBTFL6P0CB48 400 aaPredicted RBP9.66□□□□□ -0.86
XRCC3-216ENST00000556682 SLC6A8P48029 635 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 RNF144AP50876 292 aaPredicted RBP9.66□□□□□ -0.86
XRCC3-216ENST00000556682 SKP2Q13309 424 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 GNA13Q14344 377 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 TOMM34Q15785 309 aaPredicted RBP9.66□□□□□ -0.86
XRCC3-216ENST00000556682 GSTA3Q16772 222 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 EXOC3L2Q2M3D2 409 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 TIGD2Q4W5G0 525 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 PDCD4Q53EL6 469 aaKnown RBP9.66□□□□□ -0.86
XRCC3-216ENST00000556682 SLC25A53Q5H9E4 307 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 AGBL2Q5U5Z8 902 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 AP1ARQ63HQ0 302 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 TYW3Q6IPR3 259 aaKnown RBP9.66□□□□□ -0.86
XRCC3-216ENST00000556682 PAMR1Q6UXH9 720 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 FCRLAQ7L513 359 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 ZNF619Q8N2I2 560 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 SLC43A2Q8N370 569 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 ATP6V1C2Q8NEY4 427 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 ZFP90Q8TF47 636 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 PMM1Q92871 262 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 RAB8BQ92930 207 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 TRNT1Q96Q11 434 aaKnown RBP9.66□□□□□ -0.86
XRCC3-216ENST00000556682 NPAS1Q99742 590 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 TACO1Q9BSH4 297 aaKnown RBP9.66□□□□□ -0.86
XRCC3-216ENST00000556682 KLHL4Q9C0H6 718 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 SAP130Q9H0E3 1048 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 LIME1Q9H400 295 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 RMND5AQ9H871 391 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 GP6Q9HCN6 339 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 KLHL28Q9NXS3 571 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 CLEC4AQ9UMR7 237 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 PLEKHA6Q9Y2H5 1048 aa9.66□□□□□ -0.86
XRCC3-216ENST00000556682 SPIN1Q9Y657 262 aaPredicted RBP9.66□□□□□ -0.86
XRCC3-216ENST00000556682 CSMD1Q96PZ7 3565 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 ETV2O00321 342 aaPredicted RBP9.65□□□□□ -0.86
XRCC3-216ENST00000556682 HMGN4O00479 90 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 RFXANKO14593 260 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 UBDO15205 165 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 EFNA2O43921 213 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 KIAA0513O60268 411 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 DIAPH2O60879 1101 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 PRKD3O94806 890 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 ANP32DO95626 131 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 NTN1O95631 604 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 FKBP2P26885 142 aaKnown RBP9.65□□□□□ -0.86
XRCC3-216ENST00000556682 MAGEA8P43361 318 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 SESN3P58005 492 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 RAC3P60763 192 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 KCNJ10P78508 379 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 POU4F3Q15319 338 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 ZNF239Q16600 458 aaKnown RBP9.65□□□□□ -0.86
XRCC3-216ENST00000556682 NDUFAF6Q330K2 333 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 C3orf33Q6P1S2 294 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 RNF130Q86XS8 419 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 GOLGA6L1Q8N7Z2 621 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 ZNF563Q8TA94 476 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 SLC25A43Q8WUT9 341 aaPredicted RBP9.65□□□□□ -0.86
XRCC3-216ENST00000556682 ROBO4Q8WZ75 1007 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 ZNF75CPQ92670 426 aaPredicted RBP9.65□□□□□ -0.86
XRCC3-216ENST00000556682 MBD6Q96DN6 1003 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 TEX37Q96LM6 180 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 ALPK1Q96QP1 1244 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 HDHD5Q9BXW7 423 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 CXXC4Q9H2H0 198 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 PLEKHF2Q9H8W4 249 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 MTHFD2LQ9H903 347 aaPredicted RBP9.65□□□□□ -0.86
XRCC3-216ENST00000556682 ZIM2Q9NZV7 527 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 KLHL9Q9P2J3 617 aa9.65□□□□□ -0.86
XRCC3-216ENST00000556682 KCNE5Q9UJ90 142 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms