RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 POLR1CO15160 346 aaPredicted RBP16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 NGFRP08138 427 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 ZGLP1P0C6A0 271 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 CD226Q15762 336 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 ARMCX4Q5H9R4 360 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 SMARCD3Q6STE5 483 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 PAQR6Q6TCH4 344 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 FANK1Q8TC84 345 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 FGF11Q92914 225 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 ADIPOR1Q96A54 375 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 ITPKCQ96DU7 683 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 TMEM80Q96HE8 168 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 LCORQ96JN0 433 aaPredicted RBP16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 COX4I2Q96KJ9 171 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 OR52D1Q9H346 318 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 OCIAD1Q9NX40 245 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 RARRES3Q9UL19 164 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 SRPK3Q9UPE1 567 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 CDH10Q9Y6N8 788 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 TRAV27A0A087WT01 109 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 M0R296 226 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 ARHGAP33O14559 1287 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 CHP2O43745 196 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 CCR4P51679 360 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 NR0B1P51843 470 aaKnown RBP16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 FXYD6P3P58550 94 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 PRKCDQ05655 676 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 SQSTM1Q13501 440 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 SLC35F1Q5T1Q4 408 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 PEAR1Q5VY43 1037 aaPredicted RBP16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 TCEAL6Q6IPX3 200 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 APOOLQ6UXV4 268 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 SHFQ7M4L6 423 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 DTWD2Q8NBA8 298 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 OR51A7Q8NH64 312 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 PHOSPHO1Q8TCT1 267 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 DAZLQ92904 295 aaKnown RBP16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 NAT6Q93015 286 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 TCEAL3Q969E4 200 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 CDCA4Q9BXL8 241 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 TRIM2Q9C040 744 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 HHATLQ9HCP6 504 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 RPS6KB2Q9UBS0 482 aa16.84■□□□□ 0.29
SDR39U1-220ENST00000556548 OIP5O43482 229 aa16.83■□□□□ 0.28
SDR39U1-220ENST00000556548 REM1O75628 298 aa16.83■□□□□ 0.28
SDR39U1-220ENST00000556548 GUSBP08236 651 aa16.83■□□□□ 0.28
SDR39U1-220ENST00000556548 PSMD4P55036 377 aaKnown RBP16.83■□□□□ 0.28
SDR39U1-220ENST00000556548 CLPPQ16740 277 aaPredicted RBP16.83■□□□□ 0.28
SDR39U1-220ENST00000556548 PGGHGQ32M88 737 aa16.83■□□□□ 0.28
SDR39U1-220ENST00000556548 NKAIN1Q4KMZ8 207 aa16.83■□□□□ 0.28
SDR39U1-220ENST00000556548 KLHL26Q53HC5 615 aa16.83■□□□□ 0.28
SDR39U1-220ENST00000556548 YOD1Q5VVQ6 348 aaPredicted RBP16.83■□□□□ 0.28
SDR39U1-220ENST00000556548 THOC7Q6I9Y2 204 aaKnown RBP16.83■□□□□ 0.28
SDR39U1-220ENST00000556548 ZNF550Q7Z398 422 aa16.83■□□□□ 0.28
SDR39U1-220ENST00000556548 CDK20Q8IZL9 346 aa16.83■□□□□ 0.28
SDR39U1-220ENST00000556548 RNF113BQ8IZP6 322 aaKnown RBP16.83■□□□□ 0.28
SDR39U1-220ENST00000556548 ANKK1Q8NFD2 765 aa16.83■□□□□ 0.28
SDR39U1-220ENST00000556548 OR2T33Q8NG76 320 aa16.83■□□□□ 0.28
SDR39U1-220ENST00000556548 PLEKHA8Q96JA3 519 aa16.83■□□□□ 0.28
SDR39U1-220ENST00000556548 CARD8Q9Y2G2 431 aa16.83■□□□□ 0.28
SDR39U1-220ENST00000556548 FAM183AA6NL82 134 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 C17orf51A8MQB3 221 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 SURF4O15260 269 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 UTS2O95399 124 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 ANKRD34CP0C6C1 535 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 PIPP12273 146 aaPredicted RBP16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 EBPQ15125 230 aaKnown RBP16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 NANOGNBQ7Z5D8 188 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 MRGPREQ86SM8 312 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 BBS1Q8NFJ9 593 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 HS6ST2Q96MM7 605 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 UBQLN3Q9H347 655 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 IL33O95760 270 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 GADD45AP24522 165 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 CRYZQ08257 329 aaKnown RBP16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 ZNF362Q5T0B9 420 aaPredicted RBP16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 MEDAGQ5VYS4 303 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 HLA-DQA1Q5Y7H0 255 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 FCRLBQ6BAA4 426 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 CBLN3Q6UW01 205 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 THSD4Q6ZMP0 1018 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 BMP8AQ7Z5Y6 402 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 RABEPKQ7Z6M1 372 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 TMCO5AQ8N6Q1 288 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 SCAIQ8N9R8 606 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 OR52I1Q8NGK6 324 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 GFM1Q96RP9 751 aaKnown RBP16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 UBQLN4Q9NRR5 601 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 COPS7AQ9UBW8 275 aa16.82■□□□□ 0.28
SDR39U1-220ENST00000556548 FRG2CA6NGY1 282 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 SCDO00767 359 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 YKT6O15498 198 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 ICOSLGO75144 302 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 CER1O95813 267 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 GSTT2P0CG29 244 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 GSTT2BP0CG30 244 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 CSTF2P33240 577 aaKnown RBP eCLIP16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 GRK5P34947 590 aa16.81■□□□□ 0.28
SDR39U1-220ENST00000556548 SOWAHCQ53LP3 525 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms