RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 DGCR6Q14129 220 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 TAF11Q15544 211 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 NPTX1Q15818 432 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 FGD3Q5JSP0 725 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 ZNF468Q5VIY5 522 aaPredicted RBP8.41□□□□□ -1.06
ACTN1-218ENST00000556343 PRAMEF20Q5VT98 475 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 DESI1Q6ICB0 168 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 SPINK14Q6IE38 97 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 SHQ1Q6PI26 577 aaKnown RBP8.41□□□□□ -1.06
ACTN1-218ENST00000556343 TTC33Q6PID6 262 aaPredicted RBP8.41□□□□□ -1.06
ACTN1-218ENST00000556343 IGFL2Q6UWQ7 119 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 ZBTB49Q6ZSB9 765 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 RBM45Q8IUH3 476 aaKnown RBP8.41□□□□□ -1.06
ACTN1-218ENST00000556343 LACC1Q8IV20 430 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 RNF113BQ8IZP6 322 aaKnown RBP8.41□□□□□ -1.06
ACTN1-218ENST00000556343 PACRGLQ8N7B6 248 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 OR4D11Q8NGI4 311 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 ADAMTS16Q8TE57 1224 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 GIPC3Q8TF64 312 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 ST8SIA1Q92185 356 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 FRMD6Q96NE9 622 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 SMAD5Q99717 465 aaKnown RBP8.41□□□□□ -1.06
ACTN1-218ENST00000556343 RBM4BQ9BQ04 359 aaKnown RBP8.41□□□□□ -1.06
ACTN1-218ENST00000556343 RBM4Q9BWF3 364 aaKnown RBP8.41□□□□□ -1.06
ACTN1-218ENST00000556343 KLHL4Q9C0H6 718 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 DSN1Q9H410 356 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 ACER3Q9NUN7 267 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 TAS2R10Q9NYW0 307 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 PLA2G3Q9NZ20 509 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 MED11Q9P086 117 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 KIF17Q9P2E2 1029 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 ENOPH1Q9UHY7 261 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 ACAD8Q9UKU7 415 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 ICAM5Q9UMF0 924 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 A4GNTQ9UNA3 340 aa8.41□□□□□ -1.06
ACTN1-218ENST00000556343 URB1O60287 2271 aaKnown RBP8.41□□□□□ -1.06
ACTN1-218ENST00000556343 A0A0B4J2E0 115 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 A0A1B0GWA3 101 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 A0A1B0GX12 115 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 ELOA3DA6NLF2 546 aaPredicted RBP8.4□□□□□ -1.06
ACTN1-218ENST00000556343 J3KTA2 159 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 GNB5O14775 395 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 CASQ2O14958 399 aaPredicted RBP8.4□□□□□ -1.06
ACTN1-218ENST00000556343 CHP2O43745 196 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 PRSS23O95084 383 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 CAPNS1P04632 268 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 PRG2P13727 222 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 CDH2P19022 906 aaPredicted RBP8.4□□□□□ -1.06
ACTN1-218ENST00000556343 ADH6P28332 368 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 VHLP40337 213 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 PTGDSP41222 190 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 APOBEC1P41238 236 aaKnown RBP8.4□□□□□ -1.06
ACTN1-218ENST00000556343 RBM34P42696 430 aaKnown RBP8.4□□□□□ -1.06
ACTN1-218ENST00000556343 POLR2HP52434 150 aaKnown RBP8.4□□□□□ -1.06
ACTN1-218ENST00000556343 CXADRP78310 365 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 PLGLB1Q02325 96 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 QPRTQ15274 297 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 MICAQ29983 383 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.4□□□□□ -1.06
ACTN1-218ENST00000556343 NDUFAF6Q330K2 333 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 ELOA3BQ3SY89 546 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 GLYR1Q49A26 553 aaPredicted RBP8.4□□□□□ -1.06
ACTN1-218ENST00000556343 IQCCQ4KMZ1 466 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 ZNF766Q5HY98 468 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 ALG10BQ5I7T1 473 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 BICRALQ6AI39 1079 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 TIGD3Q6B0B8 471 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 C5orf46Q6UWT4 87 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 IGFL3Q6UXB1 125 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 ZNF730Q6ZMV8 503 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 GRINAQ7Z429 371 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 GDF7Q7Z4P5 450 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 ZNF605Q86T29 641 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 STK32CQ86UX6 486 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 LILRA2Q8N149 483 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 ATG16L2Q8NAA4 619 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 ELOA3Q8NG57 546 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 OR2M3Q8NG83 312 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 OR52J3Q8NH60 311 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 GPR119Q8TDV5 335 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 ACOT11Q8WXI4 607 aaPredicted RBP8.4□□□□□ -1.06
ACTN1-218ENST00000556343 DNAJC9Q8WXX5 260 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 ZBTB8AQ96BR9 441 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 DHRS1Q96LJ7 313 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 ARHGAP9Q9BRR9 750 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 SLC19A3Q9BZV2 496 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 GALNT9Q9HCQ5 603 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 ZFP64Q9NPA5 681 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 CTPS2Q9NRF8 586 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 PDP1Q9P0J1 537 aaPredicted RBP8.4□□□□□ -1.06
ACTN1-218ENST00000556343 RHCGQ9UBD6 479 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 NKX1-2Q9UD57 310 aaPredicted RBP8.4□□□□□ -1.06
ACTN1-218ENST00000556343 DKKL1Q9UK85 242 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 SLC7A7Q9UM01 511 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 MRPS18CQ9Y3D5 142 aaKnown RBP8.4□□□□□ -1.06
ACTN1-218ENST00000556343 LYVE1Q9Y5Y7 322 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 SPIN1Q9Y657 262 aaPredicted RBP8.4□□□□□ -1.06
ACTN1-218ENST00000556343 U3KQV3 271 aa8.4□□□□□ -1.06
ACTN1-218ENST00000556343 ACACAQ13085 2346 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms