RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 IQCF3P0C7M6 154 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 SLC11A2P49281 568 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 RGNQ15493 299 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 TRAM1Q15629 374 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 GFOD2Q3B7J2 385 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 SLC25A35Q3KQZ1 300 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 VITQ6UXI7 678 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 HJURPQ8NCD3 748 aaPredicted RBP8.9□□□□□ -0.99
SIX4-202ENST00000554079 OR5T3Q8NGG3 340 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 OR2G2Q8NGZ5 317 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 HMGB4Q8WW32 186 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 ROBO4Q8WZ75 1007 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 FUBP3Q96I24 572 aaKnown RBP eCLIP8.9□□□□□ -0.99
SIX4-202ENST00000554079 MGME1Q9BQP7 344 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 SUCNR1Q9BXA5 334 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 TEX101Q9BY14 249 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 PRO1933Q9H354 126 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 CCDC86Q9H6F5 360 aaKnown RBP8.9□□□□□ -0.99
SIX4-202ENST00000554079 NMRK2Q9NPI5 230 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 SIRT7Q9NRC8 400 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 MRPL17Q9NRX2 175 aaKnown RBP8.9□□□□□ -0.99
SIX4-202ENST00000554079 ELOVL2Q9NXB9 296 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 ARL5AQ9Y689 179 aa8.9□□□□□ -0.99
SIX4-202ENST00000554079 TMEM272A0A1B0GTI8 110 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 KANTRA0A1W2PQU2 76 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 TNFRSF10BO14763 440 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 PRODHO43272 600 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 RNF13O43567 381 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 FARS2O95363 451 aaKnown RBP8.89□□□□□ -0.99
SIX4-202ENST00000554079 SLC25A27O95847 323 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 RAB5AP20339 215 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 TBXA2RP21731 343 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 XPAP23025 273 aaPredicted RBP8.89□□□□□ -0.99
SIX4-202ENST00000554079 CPT2P23786 658 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 MNDAP41218 407 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 IL2P60568 153 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 CDK6Q00534 326 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 FZD5Q13467 585 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 TDGQ13569 410 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 ZNF345Q14585 488 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 TGIF1Q15583 401 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 SAPCD1Q5SSQ6 148 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 SDHAF4Q5VUM1 108 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 SBSNQ6UWP8 590 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 APOOLQ6UXV4 268 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 ZNF783Q6ZMS7 281 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 ESPNLQ6ZVH7 1005 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 ANKRD33Q7Z3H0 272 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 CTU1Q7Z7A3 348 aaKnown RBP8.89□□□□□ -0.99
SIX4-202ENST00000554079 CPXCR1Q8N123 301 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 LRRC18Q8N456 261 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 SDR9C7Q8NEX9 313 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 OR6B3Q8NGW1 331 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 POC1BQ8TC44 478 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 R3HDM4Q96D70 268 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 LRIG1Q96JA1 1093 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 ZFP42Q96MM3 310 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 WDCPQ9H6R7 721 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 SEC61A2Q9H9S3 476 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 MMP26Q9NRE1 261 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 TMEM100Q9NV29 134 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 FAM120CQ9NX05 1096 aaKnown RBP8.89□□□□□ -0.99
SIX4-202ENST00000554079 MBD1Q9UIS9 605 aaPredicted RBP8.89□□□□□ -0.99
SIX4-202ENST00000554079 SLC35A3Q9Y2D2 325 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 PLXNB2O15031 1838 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 MCM3APO60318 1980 aa8.89□□□□□ -0.99
SIX4-202ENST00000554079 IGKV6D-21A0A0A0MT36 114 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 SYT5O00445 386 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 EREGO14944 169 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 SH3BGRLO75368 114 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 NDUFB6O95139 128 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 PCDH8O95206 1070 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 INHAP05111 366 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 SERPIND1P05546 499 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 SNRPCP09234 159 aaKnown RBP8.88□□□□□ -0.99
SIX4-202ENST00000554079 UCHL1P09936 223 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 USP17L7P0C7H9 530 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 C6P13671 934 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 TYRP1P17643 537 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 STAT5AP42229 794 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 CASP9P55211 416 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 ALG11Q2TAA5 492 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 ARTNQ5T4W7 220 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 ACSM5Q6NUN0 579 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 PGBD2Q6P3X8 592 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 PLBD1Q6P4A8 553 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 TSSK4Q6SA08 328 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 TECPR1Q7Z6L1 1165 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 LRRTM1Q86UE6 522 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 ZNF614Q8N883 585 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 OR4D9Q8NGE8 314 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 OR1J4Q8NGS1 313 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 BBS10Q8TAM1 723 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 SPRYD4Q8WW59 207 aaPredicted RBP8.88□□□□□ -0.99
SIX4-202ENST00000554079 ASB13Q8WXK3 278 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 PCYT2Q99447 389 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 ELF4Q99607 663 aaPredicted RBP8.88□□□□□ -0.99
SIX4-202ENST00000554079 ALG8Q9BVK2 526 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 LINC00597Q9H2U6 94 aa8.88□□□□□ -0.99
SIX4-202ENST00000554079 SMOC1Q9H4F8 434 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms