RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 KAT2AQ92830 837 aa7.98□□□□□ -1.13
TDP1-208ENST00000553989 EXOSC8Q96B26 276 aaKnown RBP7.98□□□□□ -1.13
TDP1-208ENST00000553989 EFHD2Q96C19 240 aaPredicted RBP7.98□□□□□ -1.13
TDP1-208ENST00000553989 TM4SF18Q96CE8 201 aa7.98□□□□□ -1.13
TDP1-208ENST00000553989 CNRIP1Q96F85 164 aaPredicted RBP7.98□□□□□ -1.13
TDP1-208ENST00000553989 SLC35A4Q96G79 324 aa7.98□□□□□ -1.13
TDP1-208ENST00000553989 CENPNQ96H22 339 aaPredicted RBP7.98□□□□□ -1.13
TDP1-208ENST00000553989 ZNF845Q96IR2 970 aaPredicted RBP7.98□□□□□ -1.13
TDP1-208ENST00000553989 COX4I2Q96KJ9 171 aa7.98□□□□□ -1.13
TDP1-208ENST00000553989 DMRTB1Q96MA1 342 aa7.98□□□□□ -1.13
TDP1-208ENST00000553989 WFIKKN1Q96NZ8 548 aa7.98□□□□□ -1.13
TDP1-208ENST00000553989 PIP5K1AQ99755 562 aa7.98□□□□□ -1.13
TDP1-208ENST00000553989 G6PC3Q9BUM1 346 aa7.98□□□□□ -1.13
TDP1-208ENST00000553989 PINK1Q9BXM7 581 aa7.98□□□□□ -1.13
TDP1-208ENST00000553989 OPN3Q9H1Y3 402 aaPredicted RBP7.98□□□□□ -1.13
TDP1-208ENST00000553989 ANKRA2Q9H9E1 313 aa7.98□□□□□ -1.13
TDP1-208ENST00000553989 BRF2Q9HAW0 419 aa7.98□□□□□ -1.13
TDP1-208ENST00000553989 UBAP1Q9NZ09 502 aa7.98□□□□□ -1.13
TDP1-208ENST00000553989 ZIM2Q9NZV7 527 aa7.98□□□□□ -1.13
TDP1-208ENST00000553989 ABCD2Q9UBJ2 740 aa7.98□□□□□ -1.13
TDP1-208ENST00000553989 ZNF639Q9UID6 485 aa7.98□□□□□ -1.13
TDP1-208ENST00000553989 CES1P1Q9UKY3 287 aa7.98□□□□□ -1.13
TDP1-208ENST00000553989 MED12Q93074 2177 aa7.98□□□□□ -1.13
TDP1-208ENST00000553989 HRNRQ86YZ3 2850 aaPredicted RBP7.97□□□□□ -1.13
TDP1-208ENST00000553989 MAP1AP78559 2803 aaPredicted RBP7.97□□□□□ -1.13
TDP1-208ENST00000553989 NIPBLQ6KC79 2804 aaeCLIP7.97□□□□□ -1.13
TDP1-208ENST00000553989 SERTM1A2A2V5 107 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 PRORSD1PA6NEY8 169 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 TMEM233B4DJY2 109 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 H3BML4 177 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 H3BNH8 94 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 UBFD1O14562 309 aaKnown RBP7.97□□□□□ -1.13
TDP1-208ENST00000553989 TO15178 435 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 HCRTR2O43614 444 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 NME6O75414 186 aaPredicted RBP7.97□□□□□ -1.13
TDP1-208ENST00000553989 GMNNO75496 209 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 SLC22A3O75751 556 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 JUNP05412 331 aaKnown RBP7.97□□□□□ -1.13
TDP1-208ENST00000553989 CRHP06850 196 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 IL3P08700 152 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 PEPDP12955 493 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 ZNF23P17027 643 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 HK1P19367 917 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 PSMA4P25789 261 aaKnown RBP7.97□□□□□ -1.13
TDP1-208ENST00000553989 RFX3P48380 749 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 CDH13P55290 713 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 DSCR4P56555 118 aaPredicted RBP7.97□□□□□ -1.13
TDP1-208ENST00000553989 NME5P56597 212 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 TRA2BP62995 288 aaKnown RBP7.97□□□□□ -1.13
TDP1-208ENST00000553989 APOFQ13790 326 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 ACKR1Q16570 336 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 PDCD4Q53EL6 469 aaKnown RBP7.97□□□□□ -1.13
TDP1-208ENST00000553989 ZNF628Q5EBL2 1059 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 LCN8Q6JVE9 175 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 KRT80Q6KB66 452 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 LETMD1Q6P1Q0 360 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 C20orf204Q6ZNR8 217 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 ZNF550Q7Z398 422 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 ERI1Q8IV48 349 aaKnown RBP7.97□□□□□ -1.13
TDP1-208ENST00000553989 CROCCP3Q8IVE0 287 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 FUNDC1Q8IVP5 155 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 SLC44A2Q8IWA5 706 aaPredicted RBP7.97□□□□□ -1.13
TDP1-208ENST00000553989 SAMD14Q8IZD0 417 aaPredicted RBP7.97□□□□□ -1.13
TDP1-208ENST00000553989 FAM9CQ8IZT9 166 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 CIARTQ8N365 385 aaPredicted RBP7.97□□□□□ -1.13
TDP1-208ENST00000553989 PAPD5Q8NDF8 572 aaKnown RBP7.97□□□□□ -1.13
TDP1-208ENST00000553989 CDC26Q8NHZ8 85 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 ADAMTS16Q8TE57 1224 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 CTHRC1Q96CG8 243 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 TUBGCP3Q96CW5 907 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 LRRC58Q96CX6 371 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 STARD4Q96DR4 205 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 ARSGQ96EG1 525 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 CNBD2Q96M20 576 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 FOLH1BQ9HBA9 442 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 VPS29Q9UBQ0 182 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 LEF1Q9UJU2 399 aaPredicted RBP7.97□□□□□ -1.13
TDP1-208ENST00000553989 PROCRQ9UNN8 238 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 GPR55Q9Y2T6 319 aaPredicted RBP7.97□□□□□ -1.13
TDP1-208ENST00000553989 DNAJC15Q9Y5T4 150 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 SNX13Q9Y5W8 968 aa7.97□□□□□ -1.13
TDP1-208ENST00000553989 DHRS12A0PJE2 317 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 FAM234BA2RU67 622 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 TRIM64A6NGJ6 449 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 TRIM64BA6NI03 449 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 DEFB108AA8MXU0 73 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 C16orf97H3BN30 126 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 GMFGO60234 142 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 PCDH7O60245 1069 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 TSPAN2O60636 221 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 COQ9O75208 318 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 OR4F21O95013 312 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 PLGP00747 810 aaPredicted RBP7.96□□□□□ -1.14
TDP1-208ENST00000553989 KRT6AP02538 564 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 KRT6BP04259 564 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 RPS17P08708 135 aaKnown RBP7.96□□□□□ -1.14
TDP1-208ENST00000553989 SMIM18P0DKX4 95 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 TCN1P20061 433 aaPredicted RBP7.96□□□□□ -1.14
TDP1-208ENST00000553989 CRYGSP22914 178 aa7.96□□□□□ -1.14
TDP1-208ENST00000553989 HMOX2P30519 316 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms