RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ZNF677Q86XU0 584 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 ZNF573Q86YE8 665 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 TBC1D21Q8IYX1 336 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 CENPLQ8N0S6 344 aaPredicted RBP2.57□□□□□ -2
SCFD1-210ENST00000553693 RNF148Q8N7C7 305 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 ZNF540Q8NDQ6 660 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 FAM71CQ8NEG0 241 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 PHYHIPQ92561 330 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 BIRC7Q96CA5 298 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 C9orf85Q96MD7 179 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 ANP32EQ9BTT0 268 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 NTMT1Q9BV86 223 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 COQ10BQ9H8M1 238 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 SLC25A19Q9HC21 320 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 POLD4Q9HCU8 107 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 YAE1D1Q9NRH1 226 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 CENPMQ9NSP4 180 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 TECRQ9NZ01 308 aaKnown RBP2.57□□□□□ -2
SCFD1-210ENST00000553693 TRMT112Q9UI30 125 aaKnown RBP2.57□□□□□ -2
SCFD1-210ENST00000553693 PSORS1C1Q9UIG5 152 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 ZNF490Q9ULM2 529 aaPredicted RBP2.57□□□□□ -2
SCFD1-210ENST00000553693 SLC9A8Q9Y2E8 581 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 UBE4BO95155 1302 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 LAMA3Q16787 3333 aa2.57□□□□□ -2
SCFD1-210ENST00000553693 NUP98P52948 1817 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 SCN9AQ15858 1988 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 EYSQ5T1H1 3165 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 FAM231BA6NCW3 169 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 YJEFN3A6XGL0 299 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 A8MUI8 341 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 PTBP3O95758 552 aaKnown RBP2.56□□□□□ -2
SCFD1-210ENST00000553693 CT45A10P0DMU9 189 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 HSPA5P11021 654 aaKnown RBP2.56□□□□□ -2
SCFD1-210ENST00000553693 CCL5P13501 91 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 B4GALT1P15291 398 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 PSMB1P20618 241 aaKnown RBP2.56□□□□□ -2
SCFD1-210ENST00000553693 CYP2F1P24903 491 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 UCP1P25874 307 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 MDH1P40925 334 aaKnown RBP2.56□□□□□ -2
SCFD1-210ENST00000553693 OSTNP61366 133 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 RPS8P62241 208 aaKnown RBP2.56□□□□□ -2
SCFD1-210ENST00000553693 NOP14P78316 857 aaKnown RBP2.56□□□□□ -2
SCFD1-210ENST00000553693 SPP2Q13103 211 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 PDZK1IP1Q13113 114 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 SERTAD2Q14140 314 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 PDIA5Q14554 519 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 HAGHQ16775 308 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 CCDC57Q2TAC2 916 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 MS4A13Q5J8X5 152 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 ATAD3BQ5T9A4 648 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 TAF3Q5VWG9 929 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 OTPQ5XKR4 325 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 CDC42EP5Q6NZY7 148 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 KDELC1Q6UW63 502 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 SCARA5Q6ZMJ2 495 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 P4HA3Q7Z4N8 544 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 ERICH1Q86X53 443 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 OR10T2Q8NGX3 314 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 RNF138Q8WVD3 245 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 RAB39BQ96DA2 213 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 C16orf74Q96GX8 76 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 ZBED3Q96IU2 234 aaPredicted RBP2.56□□□□□ -2
SCFD1-210ENST00000553693 GPR137Q96N19 417 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 TXN2Q99757 166 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 FAM173AQ9BQD7 235 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 HES7Q9BYE0 225 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 SIRPDQ9H106 197 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 DEFB129Q9H1M3 183 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 SLC26A1Q9H2B4 701 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 RPAP3Q9H6T3 665 aaPredicted RBP2.56□□□□□ -2
SCFD1-210ENST00000553693 ACTR8Q9H981 624 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 DDX28Q9NUL7 540 aaKnown RBP2.56□□□□□ -2
SCFD1-210ENST00000553693 TBK1Q9UHD2 729 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 LAMP5Q9UJQ1 280 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 SMC3Q9UQE7 1217 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 MRPS7Q9Y2R9 242 aaKnown RBP2.56□□□□□ -2
SCFD1-210ENST00000553693 FLVCR1Q9Y5Y0 555 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 KIF16BQ96L93 1317 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 VCANP13611 3396 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 LAMB2P55268 1798 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 KDM3BQ7LBC6 1761 aa2.56□□□□□ -2
SCFD1-210ENST00000553693 SPTBN5Q9NRC6 3674 aaKnown RBP2.56□□□□□ -2
SCFD1-210ENST00000553693 IGLV8-61A0A075B6I0 122 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 CLRN2A0PK11 232 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 SSC5DA1L4H1 1573 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 LRRC37AA6NMS7 1700 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 ZSWIM8A7E2V4 1837 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 F8WDY8 70 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 K7ERI5 159 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 ANGPT2O15123 496 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 NUDT21O43809 227 aaKnown RBP2.55□□□□□ -2
SCFD1-210ENST00000553693 ZNF861PO60384 105 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 VPS26AO75436 327 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 UFL1O94874 794 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 HSPB1P04792 205 aaKnown RBP2.55□□□□□ -2
SCFD1-210ENST00000553693 FCER2P06734 321 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 ASNSP08243 561 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 THRBP10828 461 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 ZP3P21754 424 aa2.55□□□□□ -2
SCFD1-210ENST00000553693 PAICSP22234 425 aaKnown RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms