RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 ARHGAP24Q8N264 748 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 SLC43A2Q8N370 569 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 ANKFN1Q8N957 763 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 FAM71CQ8NEG0 241 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 GPR119Q8TDV5 335 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 CA5BP1Q8WTZ4 195 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 OTUB1Q96FW1 271 aaPredicted RBP9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 SH3YL1Q96HL8 342 aaPredicted RBP9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 RNF145Q96MT1 663 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 CPPED1Q9BRF8 314 aaPredicted RBP9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 CCDC106Q9BWC9 280 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 PINK1Q9BXM7 581 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 SLC6A15Q9H2J7 730 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 NANOGQ9H9S0 305 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 GP6Q9HCN6 339 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 FAM53CQ9NYF3 392 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 SLC25A37Q9NYZ2 338 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 RPS6KB2Q9UBS0 482 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 ZNF629Q9UEG4 869 aaPredicted RBP9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 SLC9A8Q9Y2E8 581 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 KCNE3Q9Y6H6 103 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 DOPEY1Q5JWR5 2465 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 EML6Q6ZMW3 1958 aa9.3□□□□□ -0.92
TRAFD1-208ENST00000552890 OR2M5A3KFT3 312 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 CDHR4A6H8M9 788 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 C2orf72A6NCS6 295 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 FMO6PO60774 539 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 LDLRP01130 860 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 CHRM4P08173 479 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 ZNF708P17019 499 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 PGM1P36871 562 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 UQCRFS1P47985 274 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 LHX2P50458 406 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 POLR2HP52434 150 aaKnown RBP9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 DLX5P56178 289 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 CAPRIN1Q14444 709 aaKnown RBP9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 KRT72Q14CN4 511 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 VMACQ2NL98 169 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 TMEM44Q2T9K0 475 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 SWT1Q5T5J6 900 aaKnown RBP9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 WBP2NLQ6ICG8 309 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 DHRS4L2Q6PKH6 230 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 C16orf89Q6UX73 402 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 P4HA3Q7Z4N8 544 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 GALNT10Q86SR1 603 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 OR2T12Q8NG77 320 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 OR10Q1Q8NGQ4 319 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 DNAJA4Q8WW22 397 aaPredicted RBP9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 CPNE4Q96A23 557 aaPredicted RBP9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 DDIT4LQ96D03 193 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 AURKBQ96GD4 344 aaPredicted RBP9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 WDYHV1Q96HA8 205 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 TTYH2Q9BSA4 534 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 PRRG4Q9BZD6 226 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 TRIM2Q9C040 744 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 POLR2J2Q9GZM3 115 aaKnown RBP9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 POLR2J3Q9H1A7 115 aaKnown RBP9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 MYLK2Q9H1R3 596 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 C12orf10Q9HB07 376 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 SPAG4Q9NPE6 437 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 SLC6A13Q9NSD5 602 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 PNPLA3Q9NST1 481 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 FBXO34Q9NWN3 711 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 TINAGQ9UJW2 476 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 VDAC3Q9Y277 283 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 ZNF443Q9Y2A4 671 aaPredicted RBP9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 RPH3AQ9Y2J0 694 aaPredicted RBP9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 HDGFL3Q9Y3E1 203 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 MYO7BQ6PIF6 2116 aa9.29□□□□□ -0.92
TRAFD1-208ENST00000552890 HTR3EA5X5Y0 456 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 AIM2O14862 343 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 ADAMDEC1O15204 470 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 GSTA4O15217 222 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 ZNF208O43345 1280 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 EIF1BO60739 113 aaKnown RBP9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 CELA3AP09093 270 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 PNMTP11086 282 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 HOXB6P17509 224 aaKnown RBP9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 CXCR1P25024 350 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 PCYT1AP49585 367 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 NUDT2P50583 147 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 CASP9P55211 416 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 HSF1Q00613 529 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 PMPCAQ10713 525 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 MERTKQ12866 999 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 MFSD13AQ14CX5 517 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 QPRTQ15274 297 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 RNPS1Q15287 305 aaKnown RBP9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 CD226Q15762 336 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 ACSF3Q4G176 576 aaPredicted RBP9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 MRPL2Q5T653 305 aaKnown RBP9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 DESI1Q6ICB0 168 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 CCDC80Q76M96 950 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 ZAR1Q86SH2 424 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 MRGPRGQ86SM5 289 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 RETREG3Q86VR2 466 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 CHERPQ8IWX8 916 aaKnown RBP9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 MCEMP1Q8IX19 187 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 MSRB3Q8IXL7 192 aa9.28□□□□□ -0.92
TRAFD1-208ENST00000552890 LILRA2Q8N149 483 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms