RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 KIAA0040Q15053 153 aa14.4□□□□□ -0.1
RAB5C-209ENST00000552162 EXOSC6Q5RKV6 272 aaKnown RBP14.4□□□□□ -0.1
RAB5C-209ENST00000552162 ZCCHC12Q6PEW1 402 aa14.4□□□□□ -0.1
RAB5C-209ENST00000552162 TMEM108Q6UXF1 575 aa14.4□□□□□ -0.1
RAB5C-209ENST00000552162 FBXL14Q8N1E6 418 aa14.4□□□□□ -0.1
RAB5C-209ENST00000552162 ZNF527Q8NB42 609 aa14.4□□□□□ -0.1
RAB5C-209ENST00000552162 CDS1Q92903 461 aa14.4□□□□□ -0.1
RAB5C-209ENST00000552162 ZNF775Q96BV0 537 aaPredicted RBP14.4□□□□□ -0.1
RAB5C-209ENST00000552162 CHMP6Q96FZ7 201 aa14.4□□□□□ -0.1
RAB5C-209ENST00000552162 MRGPRX4Q96LA9 322 aa14.4□□□□□ -0.1
RAB5C-209ENST00000552162 FMO2Q99518 471 aa14.4□□□□□ -0.1
RAB5C-209ENST00000552162 GRPEL1Q9HAV7 217 aa14.4□□□□□ -0.1
RAB5C-209ENST00000552162 GIN1Q9NXP7 522 aa14.4□□□□□ -0.1
RAB5C-209ENST00000552162 MGAT4BQ9UQ53 548 aa14.4□□□□□ -0.1
RAB5C-209ENST00000552162 NPIPA5A0A0B4J1W7 369 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 NPIPA7E9PJI5 369 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 H7C417 338 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 AKAP10O43572 662 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 LMX1BO60663 402 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 CYTIPO60759 359 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 TBX19O60806 448 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 RAD51DO75771 328 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 DHRS4L1P0CG22 281 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 NPIPA8P0DM63 369 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 ATP6V1C1P21283 382 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 IGFBP5P24593 272 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 NDUFAF6Q330K2 333 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 KLHL26Q53HC5 615 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 ARL13AQ5H913 290 aaPredicted RBP14.39□□□□□ -0.11
RAB5C-209ENST00000552162 LRIG3Q6UXM1 1119 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 B3GLCTQ6Y288 498 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 ZNF100Q8IYN0 542 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 ZNF433Q8N7K0 673 aaPredicted RBP14.39□□□□□ -0.11
RAB5C-209ENST00000552162 GPR119Q8TDV5 335 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 C10orf105Q8TEF2 133 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 METTL2AQ96IZ6 378 aaKnown RBP14.39□□□□□ -0.11
RAB5C-209ENST00000552162 CCT7Q99832 543 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 REEP4Q9H6H4 257 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 TNFRSF12AQ9NP84 129 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 DUSP22Q9NRW4 184 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 ACSS1Q9NUB1 689 aaPredicted RBP14.39□□□□□ -0.11
RAB5C-209ENST00000552162 SH3BP4Q9P0V3 963 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 CCL27Q9Y4X3 112 aa14.39□□□□□ -0.11
RAB5C-209ENST00000552162 ZNF724A8MTY0 619 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 NPIPB8E9PQR5 432 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 H3BNH8 94 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 H3BQF6 201 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 GSTA1P08263 222 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 CSF3P09919 207 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 SDC1P18827 310 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 EFNA1P20827 205 aaPredicted RBP14.38□□□□□ -0.11
RAB5C-209ENST00000552162 USF1P22415 310 aaPredicted RBP14.38□□□□□ -0.11
RAB5C-209ENST00000552162 PRPH2P23942 346 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 PTAFRP25105 342 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 CD40P25942 277 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 GCAP28676 217 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 FABP6P51161 128 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 ZNF83P51522 516 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 PDE7AQ13946 482 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 LASP1Q14847 261 aaKnown RBP14.38□□□□□ -0.11
RAB5C-209ENST00000552162 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.38□□□□□ -0.11
RAB5C-209ENST00000552162 C3orf33Q6P1S2 294 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 KLHL17Q6TDP4 642 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 FRMD7Q6ZUT3 714 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 IL17RELQ6ZVW7 336 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 GALNT5Q7Z7M9 940 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 TMCO5AQ8N6Q1 288 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 OR52N5Q8NH56 324 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 CLHC1Q8NHS4 586 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 ZNF75CPQ92670 426 aaPredicted RBP14.38□□□□□ -0.11
RAB5C-209ENST00000552162 PROX1Q92786 737 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 ZNF524Q96C55 264 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 CCDC126Q96EE4 140 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 FAM120BQ96EK7 910 aaKnown RBP14.38□□□□□ -0.11
RAB5C-209ENST00000552162 TSSK3Q96PN8 268 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 OR5B2Q96R09 309 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 STACQ99469 402 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 ANKZF1Q9H8Y5 726 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 CHODLQ9H9P2 273 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 ZCCHC3Q9NUD5 404 aaKnown RBP14.38□□□□□ -0.11
RAB5C-209ENST00000552162 C1orf109Q9NX04 203 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 PTGDR2Q9Y5Y4 395 aa14.38□□□□□ -0.11
RAB5C-209ENST00000552162 GTPBP1O00178 669 aaKnown RBP14.37□□□□□ -0.11
RAB5C-209ENST00000552162 H6PDO95479 791 aa14.37□□□□□ -0.11
RAB5C-209ENST00000552162 HMGN2P05204 90 aaKnown RBP14.37□□□□□ -0.11
RAB5C-209ENST00000552162 LSM11P83369 360 aaKnown RBP eCLIP14.37□□□□□ -0.11
RAB5C-209ENST00000552162 CHRNEQ04844 493 aa14.37□□□□□ -0.11
RAB5C-209ENST00000552162 CKAP4Q07065 602 aaKnown RBP14.37□□□□□ -0.11
RAB5C-209ENST00000552162 SLC25A53Q5H9E4 307 aa14.37□□□□□ -0.11
RAB5C-209ENST00000552162 CDC73Q6P1J9 531 aa14.37□□□□□ -0.11
RAB5C-209ENST00000552162 SYT10Q6XYQ8 523 aa14.37□□□□□ -0.11
RAB5C-209ENST00000552162 UBE2J2Q8N2K1 259 aa14.37□□□□□ -0.11
RAB5C-209ENST00000552162 ZNF614Q8N883 585 aa14.37□□□□□ -0.11
RAB5C-209ENST00000552162 RFWD2Q8NHY2 731 aa14.37□□□□□ -0.11
RAB5C-209ENST00000552162 IFT81Q8WYA0 676 aa14.37□□□□□ -0.11
RAB5C-209ENST00000552162 HOXD1Q9GZZ0 328 aa14.37□□□□□ -0.11
RAB5C-209ENST00000552162 PIGUQ9H490 435 aa14.37□□□□□ -0.11
RAB5C-209ENST00000552162 SIRT3Q9NTG7 399 aaPredicted RBP14.37□□□□□ -0.11
RAB5C-209ENST00000552162 KCNS2Q9ULS6 477 aa14.37□□□□□ -0.11
RAB5C-209ENST00000552162 SLC25A15Q9Y619 301 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms