RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 IGFN1Q86VF2 1251 aa19.27■□□□□ 0.67
PRDM4-205ENST00000550376 ATCAYQ86WG3 371 aa19.27■□□□□ 0.67
PRDM4-205ENST00000550376 GATAD2BQ8WXI9 593 aa19.27■□□□□ 0.67
PRDM4-205ENST00000550376 ATOH1Q92858 354 aaPredicted RBP19.27■□□□□ 0.67
PRDM4-205ENST00000550376 TMEM203Q969S6 136 aa19.27■□□□□ 0.67
PRDM4-205ENST00000550376 POLR2J2Q9GZM3 115 aaKnown RBP19.27■□□□□ 0.67
PRDM4-205ENST00000550376 ZNF768Q9H5H4 540 aaKnown RBP19.27■□□□□ 0.67
PRDM4-205ENST00000550376 PRODHO43272 600 aa19.26■□□□□ 0.67
PRDM4-205ENST00000550376 CDH11P55287 796 aa19.26■□□□□ 0.67
PRDM4-205ENST00000550376 MOGQ16653 247 aa19.26■□□□□ 0.67
PRDM4-205ENST00000550376 LIPKQ5VXJ0 399 aa19.26■□□□□ 0.67
PRDM4-205ENST00000550376 PRSS42Q7Z5A4 293 aa19.26■□□□□ 0.67
PRDM4-205ENST00000550376 NANOGP1Q8N7R0 232 aa19.26■□□□□ 0.67
PRDM4-205ENST00000550376 SMAP2Q8WU79 429 aaPredicted RBP19.26■□□□□ 0.67
PRDM4-205ENST00000550376 SH3YL1Q96HL8 342 aaPredicted RBP19.26■□□□□ 0.67
PRDM4-205ENST00000550376 IFT27Q9BW83 186 aa19.26■□□□□ 0.67
PRDM4-205ENST00000550376 PRODH2Q9UF12 536 aa19.26■□□□□ 0.67
PRDM4-205ENST00000550376 DSCR3O14972 297 aa19.26■□□□□ 0.67
PRDM4-205ENST00000550376 SLC9A3P48764 834 aa19.26■□□□□ 0.67
PRDM4-205ENST00000550376 MEDAGQ5VYS4 303 aa19.26■□□□□ 0.67
PRDM4-205ENST00000550376 ZNF613Q6PF04 617 aa19.26■□□□□ 0.67
PRDM4-205ENST00000550376 ZFP41Q8N8Y5 198 aa19.26■□□□□ 0.67
PRDM4-205ENST00000550376 CYB561A3Q8NBI2 242 aa19.26■□□□□ 0.67
PRDM4-205ENST00000550376 OR4C6Q8NH72 309 aa19.26■□□□□ 0.67
PRDM4-205ENST00000550376 C9orf43Q8TAL5 461 aaPredicted RBP19.26■□□□□ 0.67
PRDM4-205ENST00000550376 PHOSPHO1Q8TCT1 267 aa19.26■□□□□ 0.67
PRDM4-205ENST00000550376 OR1F2PQ96R84 312 aa19.26■□□□□ 0.67
PRDM4-205ENST00000550376 APMAPQ9HDC9 416 aa19.26■□□□□ 0.67
PRDM4-205ENST00000550376 EXOSC4Q9NPD3 245 aaKnown RBP19.26■□□□□ 0.67
PRDM4-205ENST00000550376 CHP2O43745 196 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 FMO6PO60774 539 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 HPGDP15428 266 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 NR0B1P51843 470 aaKnown RBP19.25■□□□□ 0.67
PRDM4-205ENST00000550376 NR0B2Q15466 257 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 BMP8AQ7Z5Y6 402 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 C9orf40Q8IXQ3 194 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 GHDCQ8N2G8 530 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 TRMT61AQ96FX7 289 aaKnown RBP19.25■□□□□ 0.67
PRDM4-205ENST00000550376 PLGRKTQ9HBL7 147 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 SEMA5BQ9P283 1151 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 FBXL4Q9UKA2 621 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 SIGLEC7Q9Y286 467 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 ALPK2Q86TB3 2170 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 TCRBV16S1A1N1A0A5B0 115 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 MYL12BO14950 172 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 GPX5O75715 221 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 RAB36O95755 333 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 IGKV3-11P04433 115 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 IDUAP35475 653 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 SLC25A30Q5SVS4 291 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 AADACL4Q5VUY2 407 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 PWWP2BQ6NUJ5 590 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 QSOX2Q6ZRP7 698 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 GRAMD2AQ8IUY3 354 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 CDK20Q8IZL9 346 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 TOR1AIP2Q8NFQ8 470 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 MVB12AQ96EY5 273 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 CTRCQ99895 268 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 SLIRPQ9GZT3 109 aaKnown RBP19.25■□□□□ 0.67
PRDM4-205ENST00000550376 RPS6KB2Q9UBS0 482 aa19.25■□□□□ 0.67
PRDM4-205ENST00000550376 YARS2Q9Y2Z4 477 aaKnown RBP19.25■□□□□ 0.67
PRDM4-205ENST00000550376 C2orf92A0A1B0GVN3 265 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 REM1O75628 298 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 CLUP10909 449 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 BMP7P18075 431 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 RORAP35398 523 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 KLHL26Q53HC5 615 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 AP1ARQ63HQ0 302 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 OAFQ86UD1 273 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 RNF113BQ8IZP6 322 aaKnown RBP19.24■□□□□ 0.67
PRDM4-205ENST00000550376 TMCO5AQ8N6Q1 288 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 THAP3Q8WTV1 239 aaPredicted RBP19.24■□□□□ 0.67
PRDM4-205ENST00000550376 ZNF578Q96N58 590 aaPredicted RBP19.24■□□□□ 0.67
PRDM4-205ENST00000550376 TAPBPLQ9BX59 468 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 AKIRIN1Q9H9L7 192 aaPredicted RBP19.24■□□□□ 0.67
PRDM4-205ENST00000550376 MMACHCQ9Y4U1 282 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 CELSR3Q9NYQ7 3312 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 IGHV5-10-1A0A0J9YXX1 117 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 CCRL2O00421 344 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 BHLHE40O14503 412 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 DGUOKQ16854 277 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 COX15Q7KZN9 410 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 PMM1Q92871 262 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 ADIPOR1Q96A54 375 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 MND1Q9BWT6 205 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 TRIM2Q9C040 744 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 KRCC1Q9NPI7 259 aaPredicted RBP19.24■□□□□ 0.67
PRDM4-205ENST00000550376 OSGIN1Q9UJX0 560 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 DIMT1Q9UNQ2 313 aaKnown RBP19.24■□□□□ 0.67
PRDM4-205ENST00000550376 PCDHGA3Q9Y5H0 932 aa19.24■□□□□ 0.67
PRDM4-205ENST00000550376 KDM4EB2RXH2 506 aaPredicted RBP19.23■□□□□ 0.67
PRDM4-205ENST00000550376 UTS2O95399 124 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 PPP1R3DO95685 299 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 PPICP45877 212 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 SERPINB10P48595 397 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 KLHL12Q53G59 568 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 WDR5BQ86VZ2 330 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 C1orf210Q8IVY1 113 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 TM9SF4Q92544 642 aa19.23■□□□□ 0.67
PRDM4-205ENST00000550376 TBX5Q99593 518 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms