RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 SCAMP2O15127 329 aaKnown RBP13.64□□□□□ -0.23
RAB5C-205ENST00000550013 TLX2O43763 284 aaPredicted RBP13.64□□□□□ -0.23
RAB5C-205ENST00000550013 LAMP1P11279 417 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 CRHR1P34998 444 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 ASMTP46597 345 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 OR3A2P47893 321 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 SUMO3P55854 103 aaPredicted RBP13.64□□□□□ -0.23
RAB5C-205ENST00000550013 C21orf58P58505 322 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 TP53BP2Q13625 1128 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 MLC1Q15049 377 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 DCST2Q5T1A1 773 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 KANK2Q63ZY3 851 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 DNAJC14Q6Y2X3 702 aaPredicted RBP13.64□□□□□ -0.23
RAB5C-205ENST00000550013 RNF165Q6ZSG1 346 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 HIPK1Q86Z02 1210 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 PHC2Q8IXK0 858 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 IFT20Q8IY31 132 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 SLC43A2Q8N370 569 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 ZNF614Q8N883 585 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 ZNF527Q8NB42 609 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 RFWD2Q8NHY2 731 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 MTERF3Q96E29 417 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 ZNF300Q96RE9 604 aaPredicted RBP13.64□□□□□ -0.23
RAB5C-205ENST00000550013 GATA5Q9BWX5 397 aaPredicted RBP13.64□□□□□ -0.23
RAB5C-205ENST00000550013 ALG2Q9H553 416 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 BCO1Q9HAY6 547 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 CISD1Q9NZ45 108 aaKnown RBP13.64□□□□□ -0.23
RAB5C-205ENST00000550013 NPAP1Q9NZP6 1156 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 KLHL9Q9P2J3 617 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 ATP6V1HQ9UI12 483 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 DNAJC15Q9Y5T4 150 aa13.64□□□□□ -0.23
RAB5C-205ENST00000550013 NPIPB9F8W1W9 429 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 H3BNH8 94 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 SMAD9O15198 467 aaKnown RBP13.63□□□□□ -0.23
RAB5C-205ENST00000550013 SHBGP04278 402 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 SLC7A1P30825 629 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 HPCAL1P37235 193 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 CCT5P48643 541 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 CDH11P55287 796 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 RAC3P60763 192 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 RASGEF1BQ0VAM2 473 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 SELENBP1Q13228 472 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 PPA1Q15181 289 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 PODNL1Q6PEZ8 512 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 R3HCC1LQ7Z5L2 792 aaKnown RBP13.63□□□□□ -0.23
RAB5C-205ENST00000550013 DTX2Q86UW9 622 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 DDIASQ8IXT1 998 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 GSPT2Q8IYD1 628 aaKnown RBP13.63□□□□□ -0.23
RAB5C-205ENST00000550013 TMCO5AQ8N6Q1 288 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 OR2W6PQ8NHA6 318 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 MRGPRX4Q96LA9 322 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 ACTRT3Q9BYD9 372 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 HOXD1Q9GZZ0 328 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 GPATCH2Q9NW75 528 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 TMED5Q9Y3A6 229 aa13.63□□□□□ -0.23
RAB5C-205ENST00000550013 IGHV4-30-2A0A087WSY4 118 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 SMIM23A6NLE4 172 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 COPEO14579 308 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 ABCD4O14678 606 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 PIP5K1BO14986 540 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 SSX4O60224 188 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 GPRIN2O60269 458 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 H6PDO95479 791 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 CHEK2O96017 543 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 FESP07332 822 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 CHRNGP07510 517 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 IGHV1-2P23083 117 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 CCT3P49368 545 aaKnown RBP13.62□□□□□ -0.23
RAB5C-205ENST00000550013 CCR4P51679 360 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 ATP12AP54707 1039 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 PCLAFQ15004 111 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 QPRTQ15274 297 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 UGT3A2Q3SY77 523 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 SPDYE7PQ495Y7 208 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 SLC25A53Q5H9E4 307 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 C4orf33Q8N1A6 199 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 OR5W2Q8NH69 310 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 ADAMTS15Q8TE58 950 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 TWIST2Q8WVJ9 160 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 ZNF75CPQ92670 426 aaPredicted RBP13.62□□□□□ -0.23
RAB5C-205ENST00000550013 OR5B2Q96R09 309 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 USB1Q9BQ65 265 aaKnown RBP13.62□□□□□ -0.23
RAB5C-205ENST00000550013 QRSL1Q9H0R6 528 aaKnown RBP13.62□□□□□ -0.23
RAB5C-205ENST00000550013 L2HGDHQ9H9P8 463 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 BARX1Q9HBU1 254 aaPredicted RBP13.62□□□□□ -0.23
RAB5C-205ENST00000550013 FAF1Q9UNN5 650 aaPredicted RBP13.62□□□□□ -0.23
RAB5C-205ENST00000550013 B3GALT5Q9Y2C3 310 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 DTNAQ9Y4J8 743 aa13.62□□□□□ -0.23
RAB5C-205ENST00000550013 A8MV72 311 aaPredicted RBP13.61□□□□□ -0.23
RAB5C-205ENST00000550013 ESPNB1AK53 854 aa13.61□□□□□ -0.23
RAB5C-205ENST00000550013 CYTIPO60759 359 aa13.61□□□□□ -0.23
RAB5C-205ENST00000550013 C6orf47O95873 294 aa13.61□□□□□ -0.23
RAB5C-205ENST00000550013 IFNA2P01563 188 aa13.61□□□□□ -0.23
RAB5C-205ENST00000550013 COX5AP20674 150 aa13.61□□□□□ -0.23
RAB5C-205ENST00000550013 IRX1P78414 480 aaPredicted RBP13.61□□□□□ -0.23
RAB5C-205ENST00000550013 TIGD2Q4W5G0 525 aa13.61□□□□□ -0.23
RAB5C-205ENST00000550013 TOR1AIP2Q8NFQ8 470 aa13.61□□□□□ -0.23
RAB5C-205ENST00000550013 OR56A1Q8NGH5 318 aa13.61□□□□□ -0.23
RAB5C-205ENST00000550013 OR5D16Q8NGK9 328 aa13.61□□□□□ -0.23
RAB5C-205ENST00000550013 PSMA8Q8TAA3 256 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms