RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 VDAC3Q9Y277 283 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 FAM215AQ9Y5M1 114 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 FLNCQ14315 2725 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 CLDN24A6NM45 220 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 AIM2O14862 343 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 SERPINB7O75635 380 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 FKBP2P26885 142 aaKnown RBP13.07□□□□□ -0.32
DDX54-203ENST00000546869 PCGF2P35227 344 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 STARP49675 285 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 ART3Q13508 389 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 KRT72Q14CN4 511 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 QPRTQ15274 297 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 TOMM34Q15785 309 aaPredicted RBP13.07□□□□□ -0.32
DDX54-203ENST00000546869 VMACQ2NL98 169 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 NDUFAF6Q330K2 333 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 ZNF311Q5JNZ3 666 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 RPS26P11Q5JNZ5 115 aaPredicted RBP13.07□□□□□ -0.32
DDX54-203ENST00000546869 MRPL2Q5T653 305 aaKnown RBP13.07□□□□□ -0.32
DDX54-203ENST00000546869 INTS11Q5TA45 600 aaKnown RBP13.07□□□□□ -0.32
DDX54-203ENST00000546869 ERICH5Q6P6B1 374 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 DHRS4L2Q6PKH6 230 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 RPTNQ6XPR3 784 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 B3GNT6Q6ZMB0 384 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 ZNF836Q6ZNA1 936 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 CCDC80Q76M96 950 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 VRK2Q86Y07 508 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 ZZZ3Q8IYH5 903 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 SSC4DQ8WTU2 575 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 CNOT9Q92600 299 aaKnown RBP13.07□□□□□ -0.32
DDX54-203ENST00000546869 CCDC120Q96HB5 630 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 REXO5Q96IC2 774 aaKnown RBP13.07□□□□□ -0.32
DDX54-203ENST00000546869 KLHDC3Q9BQ90 382 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 TTYH2Q9BSA4 534 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 TRIM8Q9BZR9 551 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 ACER3Q9NUN7 267 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 ZNF443Q9Y2A4 671 aaPredicted RBP13.07□□□□□ -0.32
DDX54-203ENST00000546869 CHST2Q9Y4C5 530 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 GTF3C1Q12789 2109 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 TENM4Q6N022 2769 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 RELNP78509 3460 aa13.07□□□□□ -0.32
DDX54-203ENST00000546869 CD8B2A6NJW9 211 aa13.06□□□□□ -0.32
DDX54-203ENST00000546869 BCAS1O75363 584 aaPredicted RBP13.06□□□□□ -0.32
DDX54-203ENST00000546869 GCM2O75603 506 aaPredicted RBP13.06□□□□□ -0.32
DDX54-203ENST00000546869 NUDT14O95848 222 aa13.06□□□□□ -0.32
DDX54-203ENST00000546869 UQCRBP14927 111 aa13.06□□□□□ -0.32
DDX54-203ENST00000546869 TIMP3P35625 211 aa13.06□□□□□ -0.32
DDX54-203ENST00000546869 APOBEC1P41238 236 aaKnown RBP13.06□□□□□ -0.32
DDX54-203ENST00000546869 RNF144AP50876 292 aaPredicted RBP13.06□□□□□ -0.32
DDX54-203ENST00000546869 MAP2K6P52564 334 aa13.06□□□□□ -0.32
DDX54-203ENST00000546869 SMSP52788 366 aa13.06□□□□□ -0.32
DDX54-203ENST00000546869 EPS8Q12929 822 aa13.06□□□□□ -0.32
DDX54-203ENST00000546869 ACSF3Q4G176 576 aaPredicted RBP13.06□□□□□ -0.32
DDX54-203ENST00000546869 C1orf185Q5T7R7 199 aa13.06□□□□□ -0.32
DDX54-203ENST00000546869 NSUN5P2Q63ZY6 315 aa13.06□□□□□ -0.32
DDX54-203ENST00000546869 ZNF550Q7Z398 422 aa13.06□□□□□ -0.32
DDX54-203ENST00000546869 PATL1Q86TB9 770 aaKnown RBP13.06□□□□□ -0.32
DDX54-203ENST00000546869 LACC1Q8IV20 430 aa13.06□□□□□ -0.32
DDX54-203ENST00000546869 SLC15A3Q8IY34 581 aa13.06□□□□□ -0.32
DDX54-203ENST00000546869 MEIOBQ8N635 442 aa13.06□□□□□ -0.32
DDX54-203ENST00000546869 FITM2Q8N6M3 262 aa13.06□□□□□ -0.32
DDX54-203ENST00000546869 TMCO5AQ8N6Q1 288 aa13.06□□□□□ -0.32
DDX54-203ENST00000546869 FBXO27Q8NI29 283 aa13.06□□□□□ -0.32
DDX54-203ENST00000546869 ZNF524Q96C55 264 aa13.06□□□□□ -0.32
DDX54-203ENST00000546869 TAGLN3Q9UI15 199 aa13.06□□□□□ -0.32
DDX54-203ENST00000546869 SH3BGRL2Q9UJC5 107 aa13.06□□□□□ -0.32
DDX54-203ENST00000546869 DNAJC13O75165 2243 aa13.06□□□□□ -0.32
DDX54-203ENST00000546869 HIVEP3Q5T1R4 2406 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 CFAP73A6NFT4 308 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 ADAMDEC1O15204 470 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 EFNA2O43921 213 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 GMFGO60234 142 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 ADAM11O75078 769 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 CYP7B1O75881 506 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 MFN2O95140 757 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 C8BP07358 591 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 GLI4P10075 376 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 POU3F2P20265 443 aaPredicted RBP13.05□□□□□ -0.32
DDX54-203ENST00000546869 ACAA2P42765 397 aaKnown RBP13.05□□□□□ -0.32
DDX54-203ENST00000546869 HTR3AP46098 478 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 MNAT1P51948 309 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 CLDN15P56746 228 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 SESN3P58005 492 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 ADORA2A-AS1P86434 159 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 RIPPLY2Q5TAB7 128 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 XKRXQ6PP77 449 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 ESPNLQ6ZVH7 1005 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 HMGN2P46Q86SG4 172 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 CLIP4Q8N3C7 705 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 MARVELD2Q8N4S9 558 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 ZNF808Q8N4W9 903 aaPredicted RBP13.05□□□□□ -0.32
DDX54-203ENST00000546869 BCAS4Q8TDM0 211 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 RASSF5Q8WWW0 418 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 ADGRG7Q96K78 797 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 RNF145Q96MT1 663 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 NPAS1Q99742 590 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 RSPO3Q9BXY4 272 aaPredicted RBP13.05□□□□□ -0.32
DDX54-203ENST00000546869 RLIMQ9NVW2 624 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 CMTM6Q9NX76 183 aa13.05□□□□□ -0.32
DDX54-203ENST00000546869 PAQR5Q9NXK6 330 aaPredicted RBP13.05□□□□□ -0.32
DDX54-203ENST00000546869 ALKBH4Q9NXW9 302 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms