RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 PRKACBP22694 351 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 TEAD1P28347 426 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 ZNF81P51508 661 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 STXBP1P61764 594 aaKnown RBP8.12□□□□□ -1.11
TDP1-204ENST00000545686 RPS7P62081 194 aaKnown RBP8.12□□□□□ -1.11
TDP1-204ENST00000545686 DEFB103AP81534 67 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 E2F1Q01094 437 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 FOXK2Q01167 660 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 ZNF85Q03923 595 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 FGFBP1Q14512 234 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 MFSD13AQ14CX5 517 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 MLF2Q15773 248 aaPredicted RBP8.12□□□□□ -1.11
TDP1-204ENST00000545686 AANATQ16613 207 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 UBE2NLQ5JXB2 153 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 ADGRG3Q86Y34 549 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 OR4N4Q8N0Y3 316 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 SIX5Q8N196 739 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 EID2Q8N6I1 236 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 MFSD9Q8NBP5 474 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 C17orf47Q8NEP4 570 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 TMEM239Q8WW34 195 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 CDS1Q92903 461 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 C12orf66Q96MD2 445 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 LRFN5Q96NI6 719 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 HCAR1Q9BXC0 346 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 C20orf85Q9H1P6 137 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 EVA1AQ9H8M9 152 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 MED20Q9H944 212 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 SLC6A20Q9NP91 592 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 TM7SF3Q9NS93 570 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 ST6GALNAC2Q9UJ37 374 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 ABT1Q9ULW3 272 aaKnown RBP8.12□□□□□ -1.11
TDP1-204ENST00000545686 SPATA2Q9UM82 520 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 MAB21L2Q9Y586 359 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 SCN3AQ9NY46 2000 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 NUP210LQ5VU65 1888 aa8.12□□□□□ -1.11
TDP1-204ENST00000545686 A0A1W2PS29 197 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 CDHR4A6H8M9 788 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 TRABD2BA6NFA1 517 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 NAP1L6A6NFF2 107 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 C1QTNF3-AMACRE9PGA6 284 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 KHNYNO15037 678 aaKnown RBP8.11□□□□□ -1.11
TDP1-204ENST00000545686 OGG1O15527 345 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 SSNA1O43805 119 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 PRICKLE3O43900 615 aaPredicted RBP8.11□□□□□ -1.11
TDP1-204ENST00000545686 LYPD3O95274 346 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 MPC2O95563 127 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 ECDO95905 644 aaPredicted RBP8.11□□□□□ -1.11
TDP1-204ENST00000545686 PCCBP05166 539 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 DBIP07108 87 aaKnown RBP8.11□□□□□ -1.11
TDP1-204ENST00000545686 ZNF3P17036 446 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 ATF1P18846 271 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 BMP8BP34820 402 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 ACTA2P62736 377 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 ACTG2P63267 376 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 DHODHQ02127 395 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 PUDPQ08623 228 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 SNTB2Q13425 540 aaKnown RBP8.11□□□□□ -1.11
TDP1-204ENST00000545686 ELFN2Q5R3F8 820 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 FAM111BQ6SJ93 734 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 OVCH1Q7RTY7 1134 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 BMP8AQ7Z5Y6 402 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 C12orf40Q86WS4 652 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 ETFBKMTQ8IXQ9 262 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 CDK20Q8IZL9 346 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 ZNF687Q8N1G0 1237 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 SYS1Q8N2H4 156 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 LRRC25Q8N386 305 aaPredicted RBP8.11□□□□□ -1.11
TDP1-204ENST00000545686 UXS1Q8NBZ7 420 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 OR51Q1Q8NH59 317 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 PHYHIPQ92561 330 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 PTP4A1Q93096 173 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 NXPE3Q969Y0 559 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 INSM2Q96T92 566 aaPredicted RBP8.11□□□□□ -1.11
TDP1-204ENST00000545686 TIMM29Q9BSF4 260 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 DPCDQ9BVM2 203 aaPredicted RBP8.11□□□□□ -1.11
TDP1-204ENST00000545686 TEX101Q9BY14 249 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 PRDM9Q9NQV7 894 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 C14orf105Q9NVL8 296 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 CLDND1Q9NY35 253 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 KIF25Q9UIL4 384 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 TBC1D3EA0A087X179 549 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 A0A1B0GUH1 482 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 ZC3H12DA2A288 527 aaKnown RBP8.11□□□□□ -1.11
TDP1-204ENST00000545686 J3QLW9 94 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 RNGTTO60942 597 aaKnown RBP8.11□□□□□ -1.11
TDP1-204ENST00000545686 REM1O75628 298 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 UCHL1P09936 223 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 PRG2P13727 222 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 ZNF19P17023 458 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 MAKP20794 623 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 NT5EP21589 574 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 LCN1P31025 176 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 P2RY2P41231 377 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 CCR6P51684 374 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 POU4F3Q15319 338 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 LTB4RQ15722 352 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 METTL11BQ5VVY1 283 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 ZNF619Q8N2I2 560 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 OR2L13Q8N349 312 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms