RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	DNAJA1	P31689	397 aa	Known RBP	12	□□□□□ -0.49
POLE-222	ENST00000545015	CHI3L1	P36222	383 aa	Predicted RBP	12	□□□□□ -0.49
POLE-222	ENST00000545015	CD79B	P40259	229 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	CDKN2C	P42773	168 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	MVD	P53602	400 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	NME5	P56597	212 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	SELENBP1	Q13228	472 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	QPRT	Q15274	297 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	NDUFAF6	Q330K2	333 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	TTMP	Q5BVD1	217 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	HBM	Q6B0K9	141 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	SPNS3	Q6ZMD2	512 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	EIF3M	Q7L2H7	374 aa	Known RBP	12	□□□□□ -0.49
POLE-222	ENST00000545015	CMIP	Q8IY22	773 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	ZNF619	Q8N2I2	560 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	CNEP1R1	Q8N9A8	125 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	LINC01560	Q8TB33	94 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	RNF128	Q8TEB7	428 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	OSTF1	Q92882	214 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	RAB8B	Q92930	207 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	CPNE4	Q96A23	557 aa	Predicted RBP	12	□□□□□ -0.49
POLE-222	ENST00000545015	OR52B2	Q96RD2	323 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	INPP5K	Q9BT40	448 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	TIGAR	Q9NQ88	270 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	EXOSC3	Q9NQT5	275 aa	Known RBP	12	□□□□□ -0.49
POLE-222	ENST00000545015	EMC9	Q9Y3B6	208 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	TESMIN	Q9Y4I5	508 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	ANKRD17	O75179	2603 aa	Known RBP	12	□□□□□ -0.49
POLE-222	ENST00000545015	SH3D21	A4FU49	640 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	RFXANK	O14593	260 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	SMNDC1	O75940	238 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
POLE-222	ENST00000545015	SYNGR4	O95473	234 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	KRT75	O95678	551 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	NUDT14	O95848	222 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	PABPC4L	P0CB38	370 aa	Known RBP	11.99	□□□□□ -0.49
POLE-222	ENST00000545015	H2AFX	P16104	143 aa	Predicted RBP	11.99	□□□□□ -0.49
POLE-222	ENST00000545015	PGC	P20142	388 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	SHC1	P29353	583 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	CARD18	P57730	90 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	IRX1	P78414	480 aa	Predicted RBP	11.99	□□□□□ -0.49
POLE-222	ENST00000545015	ZNF239	Q16600	458 aa	Known RBP	11.99	□□□□□ -0.49
POLE-222	ENST00000545015	NXN	Q6DKJ4	435 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	GTF2IRD2B	Q6EKJ0	949 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	LRRC74B	Q6ZQY2	392 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	ZNF621	Q6ZSS3	439 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	GTF2IRD2	Q86UP8	949 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	RNF130	Q86XS8	419 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	CDC20B	Q86Y33	519 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	ZNF614	Q8N883	585 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	ZFP90	Q8TF47	636 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	STON2	Q8WXE9	905 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	SLC39A3	Q9BRY0	314 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	THUMPD3	Q9BV44	507 aa	Known RBP	11.99	□□□□□ -0.49
POLE-222	ENST00000545015	PRRG4	Q9BZD6	226 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	OPN3	Q9H1Y3	402 aa	Predicted RBP	11.99	□□□□□ -0.49
POLE-222	ENST00000545015	SLC38A1	Q9H2H9	487 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	COQ10B	Q9H8M1	238 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	ACER3	Q9NUN7	267 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	TMEM45A	Q9NWC5	275 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	NDRG3	Q9UGV2	375 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	PROCR	Q9UNN8	238 aa		11.99	□□□□□ -0.49
POLE-222	ENST00000545015	FAM234B	A2RU67	622 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	AGAP5	A6NIR3	686 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	HMGB1P1	B2RPK0	211 aa	Predicted RBP	11.98	□□□□□ -0.49
POLE-222	ENST00000545015		C9JVG2	144 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	H6PD	O95479	791 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	C1QC	P02747	245 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	HRG	P04196	525 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	RPS4Y1	P22090	263 aa	Known RBP	11.98	□□□□□ -0.49
POLE-222	ENST00000545015	UGT2B10	P36537	528 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	POLR2J	P52435	117 aa	Known RBP	11.98	□□□□□ -0.49
POLE-222	ENST00000545015	CASP9	P55211	416 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	RAC3	P60763	192 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	SIRPA	P78324	504 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	KCNJ10	P78508	379 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	PLAUR	Q03405	335 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	CHRNE	Q04844	493 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	FAM27E3	Q08E93	113 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	RNPS1	Q15287	305 aa	Known RBP	11.98	□□□□□ -0.49
POLE-222	ENST00000545015	C3orf33	Q6P1S2	294 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	OLIG3	Q7RTU3	272 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	HDX	Q7Z353	690 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	MIER2	Q8N344	545 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	ZNF610	Q8N9Z0	462 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	LRRC8C	Q8TDW0	803 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	TMEM234	Q8WY98	164 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	ZG16B	Q96DA0	208 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	CCDC28B	Q9BUN5	200 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	CXXC4	Q9H2H0	198 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	TMEM185B	Q9H7F4	350 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	RMND5A	Q9H871	391 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.98	□□□□□ -0.49
POLE-222	ENST00000545015	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.98	□□□□□ -0.49
POLE-222	ENST00000545015	SLC6A13	Q9NSD5	602 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	EDAR	Q9UNE0	448 aa		11.98	□□□□□ -0.49
POLE-222	ENST00000545015	DSPP	Q9NZW4	1301 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	C16orf97	H3BN30	126 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	FAAH	O00519	579 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	DIAPH2	O60879	1101 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	OPN1LW	P04000	364 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms