RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 BPIFA2Q96DR5 249 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 CSF3RQ99062 836 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 ZNF436Q9C0F3 470 aaPredicted RBP5.4□□□□□ -1.54
VPS50-220ENST00000544910 RGCCQ9H4X1 137 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 UNKLQ9H9P5 680 aaKnown RBP5.4□□□□□ -1.54
VPS50-220ENST00000544910 STARD5Q9NSY2 213 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 FARSAQ9Y285 508 aaKnown RBP5.4□□□□□ -1.54
VPS50-220ENST00000544910 KCNIP3Q9Y2W7 256 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 TRAV27A0A087WT01 109 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 TRBV2A0A0J9YWF9 115 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 A0A1W2PQ09 198 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 IFNA17P01571 189 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 HTR1FP30939 366 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 PYCR1P32322 319 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 SLC1A3P43003 542 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 RAB38P57729 211 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 PSPHP78330 225 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 E2F1Q01094 437 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 PLEKHN1Q494U1 663 aaPredicted RBP5.4□□□□□ -1.54
VPS50-220ENST00000544910 PRSS36Q5K4E3 855 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 SLC22A10Q63ZE4 541 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 LEG1Q6P5S2 330 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 ARSKQ6UWY0 536 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 DEFB119Q8N690 84 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 DTX3Q8N9I9 347 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 KIAA1143Q96AT1 154 aaPredicted RBP5.4□□□□□ -1.54
VPS50-220ENST00000544910 ZDHHC12Q96GR4 267 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 TXNDC15Q96J42 360 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 CFHR5Q9BXR6 569 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 BEX2Q9BXY8 128 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 TEX101Q9BY14 249 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 HOXD1Q9GZZ0 328 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 SIAEQ9HAT2 523 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 EVA1BQ9NVM1 165 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 APOBEC3BQ9UH17 382 aaKnown RBP5.4□□□□□ -1.54
VPS50-220ENST00000544910 PLXNA3P51805 1871 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 ANKRD36A6QL64 1941 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 A0A1W2PPK0 400 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 PRAMEF26H0Y7S4 382 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 SULT1C2O00338 296 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 LCMT2O60294 686 aaKnown RBP5.4□□□□□ -1.55
VPS50-220ENST00000544910 RDH16O75452 317 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 IGFBP1P08833 259 aaPredicted RBP5.4□□□□□ -1.55
VPS50-220ENST00000544910 OR12D2P58182 307 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 CDC20Q12834 499 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 MRPL2Q5T653 305 aaKnown RBP5.4□□□□□ -1.55
VPS50-220ENST00000544910 ARHGAP40Q5TG30 622 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 PGAP1Q75T13 922 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 ZNF627Q7L945 461 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 OLIG3Q7RTU3 272 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 ANKRD53Q8N9V6 530 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 ELP4Q96EB1 424 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 DPYSL5Q9BPU6 564 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 SLC25A19Q9HC21 320 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 CA5BQ9Y2D0 317 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 MRPS17Q9Y2R5 130 aaKnown RBP5.4□□□□□ -1.55
VPS50-220ENST00000544910 CACNG2Q9Y698 323 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 MEIOCA2RUB1 952 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 NPIPA5E9PKD4 350 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 PHYHO14832 338 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 TPPPO94811 219 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 NDUFB2O95178 105 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 MYOGP15173 224 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 GRPRP30550 384 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 ETV5P41161 510 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 PRPS1P60891 318 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 NNATQ16517 81 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 DUSP6Q16828 381 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 COL28A1Q2UY09 1125 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 DEFB110Q30KQ9 67 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 ZNF542PQ5EBM4 170 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 C1orf53Q5VUE5 145 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 HACD4Q5VWC8 232 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 MFSD12Q6NUT3 480 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 PRSS58Q8IYP2 241 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 KIAA1958Q8N8K9 716 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 ZSCAN1Q8NBB4 408 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 OR6N2Q8NGY6 317 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 OR14K1Q8NGZ2 314 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 CREB3L4Q8TEY5 395 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 SLC25A46Q96AG3 418 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 C4orf36Q96KX1 117 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 OPALINQ96PE5 141 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 GPR174Q9BXC1 333 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 ELL3Q9HB65 397 aaPredicted RBP5.4□□□□□ -1.55
VPS50-220ENST00000544910 NPIPA1Q9UND3 350 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 UGT2A1Q9Y4X1 527 aa5.4□□□□□ -1.55
VPS50-220ENST00000544910 KIR2DS5A0A0G2JLQ3 304 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 A0A0G2JNG1 304 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 KIR2DS3K7RE56 304 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 MAN2B1O00754 1011 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 CREBL2O60519 120 aaPredicted RBP5.39□□□□□ -1.55
VPS50-220ENST00000544910 GREM1O60565 184 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 TBX19O60806 448 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 PRAF2O60831 178 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 FBLP22087 321 aaKnown RBP5.39□□□□□ -1.55
VPS50-220ENST00000544910 CD6P30203 668 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 TRIM23P36406 574 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 METAP1P53582 386 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 C1orf61Q13536 156 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms