RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 ACSS1Q9NUB1 689 aaPredicted RBP16.97■□□□□ 0.31
CCT4-204ENST00000544079 TINAGQ9UJW2 476 aa16.97■□□□□ 0.31
CCT4-204ENST00000544079 Q9Y3F1 56 aa16.97■□□□□ 0.31
CCT4-204ENST00000544079 E9PI62 339 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 SULT1C2O00338 296 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 SPDEFO95238 335 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 CTSHP09668 335 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 GJA1P17302 382 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 NDUFV2P19404 249 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 CCSMST1Q4G0I0 132 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 ZNF311Q5JNZ3 666 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 SPOUT1Q5T280 376 aaKnown RBP16.96■□□□□ 0.31
CCT4-204ENST00000544079 C9orf131Q5VYM1 1079 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 DBX2Q6ZNG2 339 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 ESPNLQ6ZVH7 1005 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 LDLRAD3Q86YD5 345 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 SPAG16Q8N0X2 631 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 MMP21Q8N119 569 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 LGALS14Q8TCE9 139 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 WDR89Q96FK6 387 aaPredicted RBP16.96■□□□□ 0.31
CCT4-204ENST00000544079 ARL5BQ96KC2 179 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 ARHGDIGQ99819 225 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 MRPL15Q9P015 296 aaKnown RBP16.96■□□□□ 0.31
CCT4-204ENST00000544079 MYEF2Q9P2K5 600 aaKnown RBP16.96■□□□□ 0.31
CCT4-204ENST00000544079 EDARQ9UNE0 448 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 A0A0G2JPF8 293 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 RFPL4AA6NLU0 287 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 HNRNPCL3B7ZW38 293 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 RFPL4AL1F8VTS6 287 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 OLFM2O95897 454 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 IGF2P01344 180 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 HNRNPCL4P0DMR1 293 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 NPPBP16860 134 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 SPINT3P49223 89 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 ANXA11P50995 505 aaKnown RBP16.96■□□□□ 0.31
CCT4-204ENST00000544079 ART1P52961 327 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 H2BFSP57053 126 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 ZNF805Q5CZA5 627 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 PRAMEF19Q5SWL8 479 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 MEX3DQ86XN8 651 aaKnown RBP16.96■□□□□ 0.31
CCT4-204ENST00000544079 SKA3Q8IX90 412 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 OR2AK2Q8NG84 335 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 OR5D16Q8NGK9 328 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 ZNF671Q8TAW3 534 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 PHYHIPQ92561 330 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 MRI1Q9BV20 369 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 AP5M1Q9H0R1 490 aa16.96■□□□□ 0.31
CCT4-204ENST00000544079 TMEM218A2RU14 115 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 TBL1XO60907 577 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 CD1AP06126 327 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 UCHL1P09936 223 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 NT5EP21589 574 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 ITGB8P26012 769 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 AGTR1P30556 359 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 KHKP50053 298 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 MLLT1Q03111 559 aaPredicted RBP16.95■□□□□ 0.3
CCT4-204ENST00000544079 SMAD2Q15796 467 aaKnown RBP16.95■□□□□ 0.3
CCT4-204ENST00000544079 UAP1L1Q3KQV9 507 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 C10orf91Q5T1B1 145 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 HEPHL1Q6MZM0 1159 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 PUSL1Q8N0Z8 303 aaKnown RBP16.95■□□□□ 0.3
CCT4-204ENST00000544079 C2orf15Q8WU43 125 aaKnown RBP16.95■□□□□ 0.3
CCT4-204ENST00000544079 TMEM159Q96B96 161 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 OR1F2PQ96R84 312 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 GINS4Q9BRT9 223 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 SGPP1Q9BX95 441 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 GPR62Q9BZJ7 368 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 RSPH9Q9H1X1 276 aaPredicted RBP16.95■□□□□ 0.3
CCT4-204ENST00000544079 ZMIZ1Q9ULJ6 1067 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 NUP210Q8TEM1 1887 aaPredicted RBP16.95■□□□□ 0.3
CCT4-204ENST00000544079 ANAPC1Q9H1A4 1944 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 SLC22A31A6NKX4 558 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 COCHO43405 550 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 PCDH8O95206 1070 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 SLC2A10O95528 541 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 LATS1O95835 1130 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 HEXAP06865 529 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 ZNF35P13682 527 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 CD52P31358 61 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 BUD31P41223 144 aaPredicted RBP16.95■□□□□ 0.3
CCT4-204ENST00000544079 ARFIP1P53367 373 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 TBPL1P62380 186 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 AVPI1Q5T686 147 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 MTFR2Q6P444 385 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 FAM199XQ6PEV8 388 aaPredicted RBP16.95■□□□□ 0.3
CCT4-204ENST00000544079 RELL2Q8NC24 303 aaPredicted RBP16.95■□□□□ 0.3
CCT4-204ENST00000544079 C17orf47Q8NEP4 570 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 ELP5Q8TE02 316 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 CXorf40AQ8TE69 158 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 XAGE5Q8WWM1 108 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 TAS2R10Q9NYW0 307 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 NOD1Q9Y239 953 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 PLEKHM1Q9Y4G2 1056 aa16.95■□□□□ 0.3
CCT4-204ENST00000544079 A0A0B4J203 849 aa16.94■□□□□ 0.3
CCT4-204ENST00000544079 VNN2O95498 520 aa16.94■□□□□ 0.3
CCT4-204ENST00000544079 GKP32189 559 aa16.94■□□□□ 0.3
CCT4-204ENST00000544079 GDI2P50395 445 aaKnown RBP16.94■□□□□ 0.3
CCT4-204ENST00000544079 HSPB3Q12988 150 aa16.94■□□□□ 0.3
CCT4-204ENST00000544079 OR7E24Q6IFN5 339 aa16.94■□□□□ 0.3
CCT4-204ENST00000544079 NXPE4Q6UWF7 544 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms