RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 IGHV1-2P23083 117 aa17.62■□□□□ 0.41
LPCAT3-211ENST00000543794 RASGEF1BQ0VAM2 473 aa17.62■□□□□ 0.41
LPCAT3-211ENST00000543794 PDE7AQ13946 482 aa17.62■□□□□ 0.41
LPCAT3-211ENST00000543794 ARL13AQ5H913 290 aaPredicted RBP17.62■□□□□ 0.41
LPCAT3-211ENST00000543794 SLC25A53Q5H9E4 307 aa17.62■□□□□ 0.41
LPCAT3-211ENST00000543794 FRMD7Q6ZUT3 714 aa17.62■□□□□ 0.41
LPCAT3-211ENST00000543794 ZNF524Q96C55 264 aa17.62■□□□□ 0.41
LPCAT3-211ENST00000543794 FAM120BQ96EK7 910 aaKnown RBP17.62■□□□□ 0.41
LPCAT3-211ENST00000543794 CCT7Q99832 543 aa17.62■□□□□ 0.41
LPCAT3-211ENST00000543794 DHRS9Q9BPW9 319 aa17.62■□□□□ 0.41
LPCAT3-211ENST00000543794 PIGUQ9H490 435 aa17.62■□□□□ 0.41
LPCAT3-211ENST00000543794 LPAR3Q9UBY5 353 aa17.62■□□□□ 0.41
LPCAT3-211ENST00000543794 DCDC2Q9UHG0 476 aa17.62■□□□□ 0.41
LPCAT3-211ENST00000543794 EMCNQ9ULC0 261 aa17.62■□□□□ 0.41
LPCAT3-211ENST00000543794 MGAT4BQ9UQ53 548 aa17.62■□□□□ 0.41
LPCAT3-211ENST00000543794 A0A1W2PNR3 127 aa17.61■□□□□ 0.41
LPCAT3-211ENST00000543794 OR5H1A6NKK0 313 aa17.61■□□□□ 0.41
LPCAT3-211ENST00000543794 ZNF724A8MTY0 619 aa17.61■□□□□ 0.41
LPCAT3-211ENST00000543794 C9JVG2 144 aa17.61■□□□□ 0.41
LPCAT3-211ENST00000543794 SLC28A1O00337 649 aa17.61■□□□□ 0.41
LPCAT3-211ENST00000543794 ABHD2P08910 425 aa17.61■□□□□ 0.41
LPCAT3-211ENST00000543794 SLC25A16P16260 332 aa17.61■□□□□ 0.41
LPCAT3-211ENST00000543794 SLC7A1P30825 629 aa17.61■□□□□ 0.41
LPCAT3-211ENST00000543794 CASP9P55211 416 aa17.61■□□□□ 0.41
LPCAT3-211ENST00000543794 SELENBP1Q13228 472 aa17.61■□□□□ 0.41
LPCAT3-211ENST00000543794 MLC1Q15049 377 aa17.61■□□□□ 0.41
LPCAT3-211ENST00000543794 RAB35Q15286 201 aa17.61■□□□□ 0.41
LPCAT3-211ENST00000543794 ZYG11AQ6WRX3 759 aa17.61■□□□□ 0.41
LPCAT3-211ENST00000543794 ZNF527Q8NB42 609 aa17.61■□□□□ 0.41
LPCAT3-211ENST00000543794 OR2W6PQ8NHA6 318 aa17.61■□□□□ 0.41
LPCAT3-211ENST00000543794 JADE3Q92613 823 aa17.61■□□□□ 0.41
LPCAT3-211ENST00000543794 CDS1Q92903 461 aa17.61■□□□□ 0.41
LPCAT3-211ENST00000543794 ZNF775Q96BV0 537 aaPredicted RBP17.61■□□□□ 0.41
LPCAT3-211ENST00000543794 TSSK3Q96PN8 268 aa17.61■□□□□ 0.41
LPCAT3-211ENST00000543794 SIRT3Q9NTG7 399 aaPredicted RBP17.61■□□□□ 0.41
LPCAT3-211ENST00000543794 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.61■□□□□ 0.414e-7■■■■■ 34.6
LPCAT3-211ENST00000543794 H3BNH8 94 aa17.6■□□□□ 0.41
LPCAT3-211ENST00000543794 ETV2O00321 342 aaPredicted RBP17.6■□□□□ 0.41
LPCAT3-211ENST00000543794 HMGN2P05204 90 aaKnown RBP17.6■□□□□ 0.41
LPCAT3-211ENST00000543794 MYL2P10916 166 aa17.6■□□□□ 0.41
LPCAT3-211ENST00000543794 SDC1P18827 310 aa17.6■□□□□ 0.41
LPCAT3-211ENST00000543794 ATP6V1C1P21283 382 aa17.6■□□□□ 0.41
LPCAT3-211ENST00000543794 LASP1Q14847 261 aaKnown RBP17.6■□□□□ 0.41
LPCAT3-211ENST00000543794 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.6■□□□□ 0.41
LPCAT3-211ENST00000543794 CYB5R2Q6BCY4 276 aa17.6■□□□□ 0.41
LPCAT3-211ENST00000543794 TMEM108Q6UXF1 575 aa17.6■□□□□ 0.41
LPCAT3-211ENST00000543794 PIAS4Q8N2W9 510 aaPredicted RBP17.6■□□□□ 0.41
LPCAT3-211ENST00000543794 MUC15Q8N387 334 aa17.6■□□□□ 0.41
LPCAT3-211ENST00000543794 ZNF433Q8N7K0 673 aaPredicted RBP17.6■□□□□ 0.41
LPCAT3-211ENST00000543794 ZNF300Q96RE9 604 aaPredicted RBP17.6■□□□□ 0.41
LPCAT3-211ENST00000543794 AMBRA1Q9C0C7 1298 aa17.6■□□□□ 0.41
LPCAT3-211ENST00000543794 ZCCHC3Q9NUD5 404 aaKnown RBP17.6■□□□□ 0.41
LPCAT3-211ENST00000543794 BAIAP2L1Q9UHR4 511 aa17.6■□□□□ 0.41
LPCAT3-211ENST00000543794 PTGDR2Q9Y5Y4 395 aa17.6■□□□□ 0.41
LPCAT3-211ENST00000543794 PLCE1Q9P212 2302 aa17.6■□□□□ 0.41
LPCAT3-211ENST00000543794 NPIPA5A0A0B4J1W7 369 aa17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 NPIPA7E9PJI5 369 aa17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 GTPBP1O00178 669 aaKnown RBP17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 SMAD9O15198 467 aaKnown RBP17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 NPIPA8P0DM63 369 aa17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 PTAFRP25105 342 aa17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 RNF144AP50876 292 aaPredicted RBP17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 ATP12AP54707 1039 aa17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 DNAJB13P59910 316 aa17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 RFTN2Q52LD8 501 aaPredicted RBP17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 CLEC6AQ6EIG7 209 aa17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 CDC73Q6P1J9 531 aa17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 SLC22A25Q6T423 547 aa17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 GALNT5Q7Z7M9 940 aa17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 ZNF100Q8IYN0 542 aa17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 FBXL14Q8N1E6 418 aa17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 ZNF525Q8N782 197 aa17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 OR5W2Q8NH69 310 aa17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 FAM168AQ92567 244 aa17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 PROX1Q92786 737 aa17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 CHMP6Q96FZ7 201 aa17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 SHARPINQ9H0F6 387 aa17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 ANKZF1Q9H8Y5 726 aa17.59■□□□□ 0.41
LPCAT3-211ENST00000543794 NPIPB9F8W1W9 429 aa17.58■□□□□ 0.4
LPCAT3-211ENST00000543794 H7C417 338 aa17.58■□□□□ 0.4
LPCAT3-211ENST00000543794 DHRS4L1P0CG22 281 aa17.58■□□□□ 0.4
LPCAT3-211ENST00000543794 EFNA1P20827 205 aaPredicted RBP17.58■□□□□ 0.4
LPCAT3-211ENST00000543794 NDUFAF6Q330K2 333 aa17.58■□□□□ 0.4
LPCAT3-211ENST00000543794 CFAP157Q5JU67 520 aa17.58■□□□□ 0.4
LPCAT3-211ENST00000543794 C17orf53Q8N3J3 647 aaPredicted RBP17.58■□□□□ 0.4
LPCAT3-211ENST00000543794 OR2T11Q8NH01 316 aa17.58■□□□□ 0.4
LPCAT3-211ENST00000543794 CLHC1Q8NHS4 586 aa17.58■□□□□ 0.4
LPCAT3-211ENST00000543794 C10orf105Q8TEF2 133 aa17.58■□□□□ 0.4
LPCAT3-211ENST00000543794 MZB1Q8WU39 189 aa17.58■□□□□ 0.4
LPCAT3-211ENST00000543794 HTRA1Q92743 480 aa17.58■□□□□ 0.4
LPCAT3-211ENST00000543794 MTERF3Q96E29 417 aa17.58■□□□□ 0.4
LPCAT3-211ENST00000543794 C19orf24Q9BVV8 132 aa17.58■□□□□ 0.4
LPCAT3-211ENST00000543794 POU2F3Q9UKI9 436 aa17.58■□□□□ 0.4
LPCAT3-211ENST00000543794 DTNAQ9Y4J8 743 aa17.58■□□□□ 0.4
LPCAT3-211ENST00000543794 SLC25A15Q9Y619 301 aa17.58■□□□□ 0.4
LPCAT3-211ENST00000543794 YLPM1P49750 1951 aaKnown RBP17.57■□□□□ 0.4
LPCAT3-211ENST00000543794 ESPNB1AK53 854 aa17.57■□□□□ 0.4
LPCAT3-211ENST00000543794 LMX1BO60663 402 aa17.57■□□□□ 0.4
LPCAT3-211ENST00000543794 H6PDO95479 791 aa17.57■□□□□ 0.4
LPCAT3-211ENST00000543794 IGHV4-31P0DP07 118 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms