RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 ANGPTL1O95841 491 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 PNPP00491 289 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 KNG1P01042 644 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 KLK1P06870 262 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 CT45A8P0DMV1 189 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 CT45A9P0DMV2 189 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 OSMP13725 252 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 ZNF17P17021 662 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 ENPP1P22413 925 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 PRTN3P24158 256 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 GIFP27352 417 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 SHC1P29353 583 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 SERPINF1P36955 418 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 OR3A2P47893 321 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 IDH3GP51553 393 aaPredicted RBP4.15□□□□□ -1.75
LIMS1-214ENST00000542845 GPX6P59796 221 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 MRPS22P82650 360 aaKnown RBP4.15□□□□□ -1.75
LIMS1-214ENST00000542845 CDKL1Q00532 357 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 CDK16Q00536 496 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 IL1RL1Q01638 556 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 CSTF3Q12996 717 aaKnown RBP4.15□□□□□ -1.75
LIMS1-214ENST00000542845 BAMBIQ13145 260 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 TGFBIQ15582 683 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 ZNF239Q16600 458 aaKnown RBP4.15□□□□□ -1.75
LIMS1-214ENST00000542845 NKPD1Q17RQ9 610 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 GLYR1Q49A26 553 aaPredicted RBP4.15□□□□□ -1.75
LIMS1-214ENST00000542845 CT45A2Q5DJT8 189 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 ARL13AQ5H913 290 aaPredicted RBP4.15□□□□□ -1.75
LIMS1-214ENST00000542845 ZNF311Q5JNZ3 666 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 VAX1Q5SQQ9 334 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 CCNYL2Q5T2Q4 361 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 CPTPQ5TA50 214 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 LEG1Q6P5S2 330 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 NPSR1Q6W5P4 371 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 Q6ZPA2 131 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 FRMD7Q6ZUT3 714 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 ESPNLQ6ZVH7 1005 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 CARM1Q86X55 608 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 NUDT13Q86X67 352 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 GAS2L3Q86XJ1 694 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 TDRPQ86YL5 185 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 LAS2Q8IYD9 372 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 TXLNBQ8N3L3 684 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 KIR3DL3Q8N743 410 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 ZNF433Q8N7K0 673 aaPredicted RBP4.15□□□□□ -1.75
LIMS1-214ENST00000542845 GATSQ8NAP1 163 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 VPS37AQ8NEZ2 397 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 OR51F2Q8NH61 342 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 CLDND2Q8NHS1 167 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 NANPQ8TBE9 248 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 MRAPQ8TCY5 172 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 RNF128Q8TEB7 428 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 ANKRD49Q8WVL7 239 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 KLHL29Q96CT2 875 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 PDLIM5Q96HC4 596 aaKnown RBP4.15□□□□□ -1.75
LIMS1-214ENST00000542845 SH3YL1Q96HL8 342 aaPredicted RBP4.15□□□□□ -1.75
LIMS1-214ENST00000542845 ADGRG7Q96K78 797 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 ZNF300Q96RE9 604 aaPredicted RBP4.15□□□□□ -1.75
LIMS1-214ENST00000542845 KCNS3Q9BQ31 491 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 SRXN1Q9BYN0 137 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 FRMD8P1Q9BZ68 369 aaPredicted RBP4.15□□□□□ -1.75
LIMS1-214ENST00000542845 SLITRK2Q9H156 845 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 MMP27Q9H306 513 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 TPK1Q9H3S4 243 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 NTN4Q9HB63 628 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 MID2Q9UJV3 735 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 SLC25A15Q9Y619 301 aa4.15□□□□□ -1.75
LIMS1-214ENST00000542845 GOLGA8QA0A0J9YX86 632 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 LOC100653049A0A140TA62 436 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 TMEM82A0PJX8 343 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 GOLGA8OA6NCC3 632 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 DNAJC9-AS1A6NH13 148 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 B9A039 149 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 GOLGA8NF8WBI6 632 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 GOLGA8RI6L899 631 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 KLF11O14901 512 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 WNT9BO14905 357 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 ADAMDEC1O15204 470 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 BANF1O75531 89 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 SKAP2O75563 359 aaPredicted RBP4.14□□□□□ -1.75
LIMS1-214ENST00000542845 BCAS2O75934 225 aaPredicted RBP4.14□□□□□ -1.75
LIMS1-214ENST00000542845 KRT34O76011 436 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 PRSS23O95084 383 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 PGM3O95394 542 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 F13BP05160 661 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 OR4A8P0C604 315 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 CLEC2LP0C7M8 214 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 GAAP10253 952 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 MTHFD2P13995 350 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 ZNF37AP17032 561 aaPredicted RBP4.14□□□□□ -1.75
LIMS1-214ENST00000542845 CDH2P19022 906 aaPredicted RBP4.14□□□□□ -1.75
LIMS1-214ENST00000542845 EPORP19235 508 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 CSNK2A2P19784 350 aaPredicted RBP4.14□□□□□ -1.75
LIMS1-214ENST00000542845 SERPINB1P30740 379 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 GCH1P30793 250 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 ARL1P40616 181 aaPredicted RBP4.14□□□□□ -1.75
LIMS1-214ENST00000542845 GPR6P46095 362 aaPredicted RBP4.14□□□□□ -1.75
LIMS1-214ENST00000542845 PIK3CGP48736 1102 aa4.14□□□□□ -1.75
LIMS1-214ENST00000542845 ZNF41P51814 821 aaPredicted RBP4.14□□□□□ -1.75
LIMS1-214ENST00000542845 MANFP55145 182 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms