RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 FAM111BQ6SJ93 734 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 SLC22A25Q6T423 547 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 TMEM108Q6UXF1 575 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 LRRC70Q7Z2Q7 622 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 WDR75Q8IWA0 830 aaKnown RBP4.04□□□□□ -1.76
SNHG1-214ENST00000540865 C1orf162Q8NEQ5 155 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-214ENST00000540865 TRIM58Q8NG06 486 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 OR52R1Q8NGF1 315 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 OR10D3Q8NH80 312 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 OR2V1Q8NHB1 315 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 HUS1BQ8NHY5 278 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 KCTD4Q8WVF5 259 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 MAIP1Q8WWC4 291 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 C3orf49Q96BT1 292 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 SLC7A6OSQ96CW6 309 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-214ENST00000540865 C1GALT1C1Q96EU7 318 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 FOXN4Q96NZ1 517 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 BTBD9Q96Q07 612 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 GPHA2Q96T91 129 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 SSBP3Q9BWW4 388 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-214ENST00000540865 ZNF717Q9BY31 904 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-214ENST00000540865 METTL17Q9H7H0 456 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-214ENST00000540865 SAYSD1Q9NPB0 183 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 SMYD2Q9NRG4 433 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 MAT2BQ9NZL9 334 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 NPAP1Q9NZP6 1156 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 MED11Q9P086 117 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 POU2F3Q9UKI9 436 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 OAZ3Q9UMX2 235 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 PLLPQ9Y342 182 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 REXO2Q9Y3B8 237 aaKnown RBP4.04□□□□□ -1.76
SNHG1-214ENST00000540865 TSC22D4Q9Y3Q8 395 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 PCDHGB1Q9Y5G3 927 aa4.04□□□□□ -1.76
SNHG1-214ENST00000540865 A0A087WZY1 265 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 IGLV3-32A0A0A0MS00 114 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 GOLGA6L10A6NI86 522 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 OR5H1A6NKK0 313 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 C17orf51A8MQB3 221 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 ZNF814B7Z6K7 855 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 SCO2O43819 266 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 CXCL13O43927 109 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 FADS1O60427 444 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 CCNT2O60583 730 aaKnown RBP4.03□□□□□ -1.76
SNHG1-214ENST00000540865 TMEM127O75204 238 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 LY6HO94772 140 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 PGM3O95394 542 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 YES1P07947 543 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 TACSTD2P09758 323 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 GGT1P19440 569 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 CSNK2A2P19784 350 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-214ENST00000540865 APOBEC3AP31941 199 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-214ENST00000540865 KCNJ1P48048 391 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 MTNR1BP49286 362 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 VPS41P49754 854 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 CLK3P49761 638 aaKnown RBP4.03□□□□□ -1.76
SNHG1-214ENST00000540865 CHN2P52757 468 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 CDH15P55291 814 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 CARD18P57730 90 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 PHEXP78562 749 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 FOXL1Q12952 345 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 DDX39BQ13838 428 aaKnown RBP4.03□□□□□ -1.76
SNHG1-214ENST00000540865 ACAP2Q15057 778 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 TRIP13Q15645 432 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-214ENST00000540865 STK11Q15831 433 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 CARTPTQ16568 116 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 TRMT12Q53H54 448 aaKnown RBP4.03□□□□□ -1.76
SNHG1-214ENST00000540865 TCHHL1Q5QJ38 904 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-214ENST00000540865 PDSS1Q5T2R2 415 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 LGSNQ5TDP6 509 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 GRHL2Q6ISB3 625 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 SLC48A1Q6P1K1 146 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 KLHL17Q6TDP4 642 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 B3GLCTQ6Y288 498 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 Q6ZT83 130 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 NUFIP2Q7Z417 695 aaKnown RBP4.03□□□□□ -1.76
SNHG1-214ENST00000540865 NUDT13Q86X67 352 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 TXLNBQ8N3L3 684 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 GTPBP8Q8N3Z3 284 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-214ENST00000540865 RNF175Q8N4F7 328 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 PDPRQ8NCN5 879 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 RNF128Q8TEB7 428 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 ANKRD49Q8WVL7 239 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 OSTF1Q92882 214 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 MRPL24Q96A35 216 aaKnown RBP4.03□□□□□ -1.76
SNHG1-214ENST00000540865 NXNL1Q96CM4 212 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 ERP27Q96DN0 273 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 MTBPQ96DY7 904 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 RAX2Q96IS3 184 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 OR14A2Q96R54 314 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 MTERF1Q99551 399 aaKnown RBP4.03□□□□□ -1.76
SNHG1-214ENST00000540865 INPP5KQ9BT40 448 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 NAT9Q9BTE0 207 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 TRMOQ9BU70 441 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 BPESC1Q9GZL8 116 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 DERL2Q9GZP9 239 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 POPDC3Q9HBV1 291 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 MYNNQ9NPC7 610 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 KLHL13Q9P2N7 655 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 CES1P1Q9UKY3 287 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 PSME2Q9UL46 239 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms