RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 ZNF14P17017 642 aaPredicted RBP8.11□□□□□ -1.11
DDB1-217ENST00000540166 NSG1P42857 185 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 MAPK9P45984 424 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 SNRPGP62308 76 aaKnown RBP8.11□□□□□ -1.11
DDB1-217ENST00000540166 RPS21P63220 83 aaKnown RBP8.11□□□□□ -1.11
DDB1-217ENST00000540166 SLC3A1Q07837 685 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 SF1Q15637 639 aaKnown RBP8.11□□□□□ -1.11
DDB1-217ENST00000540166 C6orf132Q5T0Z8 1188 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 TFAP2EQ6VUC0 442 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 TRIM46Q7Z4K8 759 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 APCDD1Q8J025 514 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 FAM181AQ8N9Y4 354 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 DCAF4L2Q8NA75 395 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 OR5M3Q8NGP4 307 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 ZCCHC14Q8WYQ9 949 aaKnown RBP8.11□□□□□ -1.11
DDB1-217ENST00000540166 FSCN3Q9NQT6 498 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 PRDM9Q9NQV7 894 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 CD84Q9UIB8 345 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 GPR52Q9Y2T5 361 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 IGLV3-10A0A075B6K4 115 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 FAAHO00519 579 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 TAPBPO15533 448 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 ADAM11O75078 769 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 MTX2O75431 263 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 S100A8P05109 93 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 ELFN1P0C7U0 828 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 JMJD7P0C870 316 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 LRRC73Q5JTD7 316 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 UNC5DQ6UXZ4 953 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 QSOX2Q6ZRP7 698 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 BTN2A1Q7KYR7 527 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 SLC16A13Q7RTY0 426 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 HSD17B13Q7Z5P4 300 aaPredicted RBP8.11□□□□□ -1.11
DDB1-217ENST00000540166 PTOV1Q86YD1 416 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 FRMD1Q8N878 549 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 WDSUB1Q8N9V3 476 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 TMEM159Q96B96 161 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 ATF6BQ99941 703 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 C7orf50Q9BRJ6 194 aaKnown RBP8.11□□□□□ -1.11
DDB1-217ENST00000540166 YIPF4Q9BSR8 244 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 STRADBQ9C0K7 418 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 PCED1AQ9H1Q7 454 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 RSPH9Q9H1X1 276 aaPredicted RBP8.11□□□□□ -1.11
DDB1-217ENST00000540166 TMEM185BQ9H7F4 350 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 PHPT1Q9NRX4 125 aaPredicted RBP8.11□□□□□ -1.11
DDB1-217ENST00000540166 THSD1Q9NS62 852 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 PRSS21Q9Y6M0 314 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 MFSD2BA6NFX1 497 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 GABRR3A8MPY1 467 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 C2orf74A8MZ97 194 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 SULT1C2O00338 296 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 FMO6PO60774 539 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 FZD7O75084 574 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 VEGFCP49767 419 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 PSMD4P55036 377 aaKnown RBP8.11□□□□□ -1.11
DDB1-217ENST00000540166 OC90Q02509 493 aaPredicted RBP8.11□□□□□ -1.11
DDB1-217ENST00000540166 GPR33Q49SQ1 333 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 C22orf39Q6P5X5 142 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 NAXDQ8IW45 347 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 LKAAEAR1Q8TD35 194 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 CNOT9Q92600 299 aaKnown RBP8.11□□□□□ -1.11
DDB1-217ENST00000540166 SCMH1Q96GD3 660 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 SPATA5L1Q9BVQ7 753 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 EVA1AQ9H8M9 152 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 SLC6A20Q9NP91 592 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 TAS2R10Q9NYW0 307 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 PPT2Q9UMR5 302 aa8.11□□□□□ -1.11
DDB1-217ENST00000540166 FAM74A7A6NL05 159 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 RGS9O75916 674 aaPredicted RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 GBAP04062 536 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 BPIP17213 487 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 KIR2DL1P43626 348 aaPredicted RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 RAB40BQ12829 278 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 ILF3Q12906 894 aaKnown RBP eCLIP8.1□□□□□ -1.11
DDB1-217ENST00000540166 NDUFA9Q16795 377 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 FAM74A3Q4VXF1 159 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 ZNF542PQ5EBM4 170 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 TNFAIP8L2Q6P589 184 aaPredicted RBP8.1□□□□□ -1.11
DDB1-217ENST00000540166 TMUB2Q71RG4 321 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 SSX6Q7RTT6 188 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 TMPRSS9Q7Z410 1059 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 PAQR7Q86WK9 346 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 OR6S1Q8NH40 331 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 C1orf216Q8TAB5 229 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 WDR20Q8TBZ3 569 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 FATE1Q969F0 183 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 PDXPQ96GD0 296 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 TRIB3Q96RU7 358 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 NTMT1Q9BV86 223 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 TMEM184CQ9NVA4 438 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 C2orf42Q9NWW7 574 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 PLEKHA6Q9Y2H5 1048 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 KCNMB2Q9Y691 235 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 AP1M2Q9Y6Q5 423 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 BRCA2P51587 3418 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 NUMA1Q14980 2115 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 C7orf66A4D0T2 115 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 OR2AT4A6NND4 320 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 RHPN2P1A8MT19 583 aa8.1□□□□□ -1.11
DDB1-217ENST00000540166 ZNF705EA8MWA4 302 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms