RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 TPD52L3Q96J77 140 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 GNRHR2Q96P88 292 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 DSN1Q9H410 356 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 EXOSC3Q9NQT5 275 aaKnown RBP14.06□□□□□ -0.16
DDB1-216ENST00000539739 DCAF13Q9NV06 445 aaKnown RBP14.06□□□□□ -0.16
DDB1-216ENST00000539739 RLIMQ9NVW2 624 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 DNAJB12Q9NXW2 375 aaKnown RBP14.06□□□□□ -0.16
DDB1-216ENST00000539739 MED11Q9P086 117 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 SLC7A8Q9UHI5 535 aa14.06□□□□□ -0.16
DDB1-216ENST00000539739 PINLYPA6NC86 204 aa14.05□□□□□ -0.16
DDB1-216ENST00000539739 TPST1O60507 370 aa14.05□□□□□ -0.16
DDB1-216ENST00000539739 NUDT14O95848 222 aa14.05□□□□□ -0.16
DDB1-216ENST00000539739 LGI1O95970 557 aa14.05□□□□□ -0.16
DDB1-216ENST00000539739 CD247P20963 164 aa14.05□□□□□ -0.16
DDB1-216ENST00000539739 PTDSS1P48651 473 aaKnown RBP14.05□□□□□ -0.16
DDB1-216ENST00000539739 CCR4P51679 360 aa14.05□□□□□ -0.16
DDB1-216ENST00000539739 SUMO3P55854 103 aaPredicted RBP14.05□□□□□ -0.16
DDB1-216ENST00000539739 SKP2Q13309 424 aa14.05□□□□□ -0.16
DDB1-216ENST00000539739 INPP5JQ15735 1006 aaPredicted RBP14.05□□□□□ -0.16
DDB1-216ENST00000539739 LCN8Q6JVE9 175 aa14.05□□□□□ -0.16
DDB1-216ENST00000539739 PCSK4Q6UW60 755 aa14.05□□□□□ -0.16
DDB1-216ENST00000539739 CYP2R1Q6VVX0 501 aa14.05□□□□□ -0.16
DDB1-216ENST00000539739 ZNF550Q7Z398 422 aa14.05□□□□□ -0.16
DDB1-216ENST00000539739 SLC22A16Q86VW1 577 aa14.05□□□□□ -0.16
DDB1-216ENST00000539739 FAM71CQ8NEG0 241 aa14.05□□□□□ -0.16
DDB1-216ENST00000539739 CNOT9Q92600 299 aaKnown RBP14.05□□□□□ -0.16
DDB1-216ENST00000539739 TTTY12Q9BZ98 90 aa14.05□□□□□ -0.16
DDB1-216ENST00000539739 POMPQ9Y244 141 aa14.05□□□□□ -0.16
DDB1-216ENST00000539739 SLC9A8Q9Y2E8 581 aa14.05□□□□□ -0.16
DDB1-216ENST00000539739 EML6Q6ZMW3 1958 aa14.05□□□□□ -0.16
DDB1-216ENST00000539739 ATMQ13315 3056 aa14.05□□□□□ -0.16
DDB1-216ENST00000539739 LRRC3CA6NJW4 275 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 FAM47E-STBD1D6RA91 191 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 ACOT8O14734 319 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 GMFGO60234 142 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 UQCRBP14927 111 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 RFC3P40938 356 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 SLC6A8P48029 635 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 CBFBQ13951 182 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 FLOT2Q14254 428 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 NDUFAF6Q330K2 333 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 CBLN3Q6UW01 205 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 FKBP9P1Q75LS8 142 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 FADS6Q8N9I5 356 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 OR2M3Q8NG83 312 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 GPR32P1Q8NGA4 272 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 OR5W2Q8NH69 310 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 OLAHQ9NV23 265 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 UBAP1Q9NZ09 502 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 CHST2Q9Y4C5 530 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 TLN1Q9Y490 2541 aaKnown RBP14.04□□□□□ -0.16
DDB1-216ENST00000539739 ANKUB1A6NFN9 424 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 C17orf51A8MQB3 221 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 ATXN7O15265 892 aaPredicted RBP14.04□□□□□ -0.16
DDB1-216ENST00000539739 GLSO94925 669 aaPredicted RBP14.04□□□□□ -0.16
DDB1-216ENST00000539739 CRYABP02511 175 aaKnown RBP14.04□□□□□ -0.16
DDB1-216ENST00000539739 GDF1P27539 372 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 DSCR4P56555 118 aaPredicted RBP14.04□□□□□ -0.16
DDB1-216ENST00000539739 PPIAP62937 165 aaKnown RBP14.04□□□□□ -0.16
DDB1-216ENST00000539739 TUBA1BP68363 451 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 GANABQ14697 944 aaKnown RBP14.04□□□□□ -0.16
DDB1-216ENST00000539739 TOMM20Q15388 145 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 HYAL4Q2M3T9 481 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 C1orf146Q5VVC0 180 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 TUBA1AQ71U36 451 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 INIPQ9NRY2 104 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 LUZP4Q9P127 313 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 DKKL1Q9UK85 242 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 FBXL2Q9UKC9 423 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 ICAM5Q9UMF0 924 aa14.04□□□□□ -0.16
DDB1-216ENST00000539739 FAM32AQ9Y421 112 aaKnown RBP14.04□□□□□ -0.16
DDB1-216ENST00000539739 ITPR1Q14643 2758 aa14.03□□□□□ -0.16
DDB1-216ENST00000539739 SPTA1P02549 2419 aa14.03□□□□□ -0.16
DDB1-216ENST00000539739 FAM166BA8MTA8 275 aa14.03□□□□□ -0.16
DDB1-216ENST00000539739 OIP5O43482 229 aa14.03□□□□□ -0.16
DDB1-216ENST00000539739 BCAS1O75363 584 aaPredicted RBP14.03□□□□□ -0.16
DDB1-216ENST00000539739 GKN3PP0CG01 181 aa14.03□□□□□ -0.16
DDB1-216ENST00000539739 PGCP20142 388 aa14.03□□□□□ -0.16
DDB1-216ENST00000539739 ATP6V1B2P21281 511 aa14.03□□□□□ -0.16
DDB1-216ENST00000539739 RYKP34925 604 aa14.03□□□□□ -0.16
DDB1-216ENST00000539739 ZNF41P51814 821 aaPredicted RBP14.03□□□□□ -0.16
DDB1-216ENST00000539739 RGS8P57771 180 aaPredicted RBP14.03□□□□□ -0.16
DDB1-216ENST00000539739 PMP22Q01453 160 aa14.03□□□□□ -0.16
DDB1-216ENST00000539739 NRF1Q16656 503 aa14.03□□□□□ -0.16
DDB1-216ENST00000539739 IFI44LQ53G44 452 aa14.03□□□□□ -0.16
DDB1-216ENST00000539739 FAM180AQ6UWF9 173 aa14.03□□□□□ -0.16
DDB1-216ENST00000539739 SPATA24Q86W54 205 aa14.03□□□□□ -0.16
DDB1-216ENST00000539739 OR10Q1Q8NGQ4 319 aa14.03□□□□□ -0.16
DDB1-216ENST00000539739 UTP4Q969X6 686 aaKnown RBP14.03□□□□□ -0.16
DDB1-216ENST00000539739 ARSGQ96EG1 525 aa14.03□□□□□ -0.16
DDB1-216ENST00000539739 HSH2DQ96JZ2 352 aa14.03□□□□□ -0.16
DDB1-216ENST00000539739 ARHGDIGQ99819 225 aa14.03□□□□□ -0.16
DDB1-216ENST00000539739 RSPO3Q9BXY4 272 aaPredicted RBP14.03□□□□□ -0.16
DDB1-216ENST00000539739 A0A087WZY1 265 aa14.02□□□□□ -0.16
DDB1-216ENST00000539739 AQP12BA6NM10 295 aa14.02□□□□□ -0.16
DDB1-216ENST00000539739 TFECO14948 347 aaPredicted RBP14.02□□□□□ -0.16
DDB1-216ENST00000539739 FRS3O43559 492 aa14.02□□□□□ -0.16
DDB1-216ENST00000539739 CDC40O60508 579 aaKnown RBP eCLIP14.02□□□□□ -0.16
DDB1-216ENST00000539739 TRAPPC6AO75865 159 aa14.02□□□□□ -0.16
DDB1-216ENST00000539739 PRKD3O94806 890 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms