RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 CBFBQ13951 182 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 CASP8Q14790 479 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ZNF141Q15928 474 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ZNF239Q16600 458 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 TOR1AIP2Q8NFQ8 470 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 MIPOL1Q8TD10 442 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ABHD3Q8WU67 409 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 REXO5Q96IC2 774 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 MRGPRX4Q96LA9 322 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 SLC35A5Q9BS91 424 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 THUMPD3Q9BV44 507 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 TMUB1Q9BVT8 246 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 TIGARQ9NQ88 270 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 GLRX2Q9NS18 164 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 EXD2Q9NVH0 621 aa17.03■□□□□ 0.32
TNFRSF1A-212ENST00000539372 GOLGA8QA0A0J9YX86 632 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 GOLGA8OA6NCC3 632 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 GOLGA8NF8WBI6 632 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 NTN1O95631 604 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 CSTAP01040 98 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 UBTFL6P0CB48 400 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 KITP10721 976 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 CD53P19397 219 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 KLK2P20151 261 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 AGTR1P30556 359 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 CHI3L1P36222 383 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 SKP2Q13309 424 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 MAPK14Q16539 360 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ATAD3BQ5T9A4 648 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 SAXO2Q658L1 398 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 GTF2IRD2BQ6EKJ0 949 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 HEPHL1Q6MZM0 1159 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 OGFOD2Q6N063 350 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 HMGN2P46Q86SG4 172 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 GTF2IRD2Q86UP8 949 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 LRRC34Q8IZ02 419 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ZFP90Q8TF47 636 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 CPNE4Q96A23 557 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 LAT2Q9GZY6 243 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 QRSL1Q9H0R6 528 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 WDR55Q9H6Y2 383 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 COQ10BQ9H8M1 238 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 AIG1Q9NVV5 245 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 THAP1Q9NVV9 213 aa17.02■□□□□ 0.32
TNFRSF1A-212ENST00000539372 IGHV3-15A0A0B4J1V0 119 aa17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 A0A1W2PNR3 127 aa17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 KIAA0513O60268 411 aa17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 NID1P14543 1247 aa17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 EPHA3P29320 983 aa17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 IL12AP29459 219 aa17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 KHKP50053 298 aa17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 MAGOHP61326 146 aaKnown RBP17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 ADAM8P78325 824 aa17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 FUT5Q11128 374 aa17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 FOXD4Q12950 439 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 SELENBP1Q13228 472 aa17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 DPY19L1Q2PZI1 675 aa17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 TYW3Q6IPR3 259 aaKnown RBP17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 STAC2Q6ZMT1 411 aa17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 FCRLAQ7L513 359 aa17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 SPATA19Q7Z5L4 167 aa17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 RNF128Q8TEB7 428 aa17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 ROPN1LQ96C74 230 aa17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 NEURL3Q96EH8 262 aa17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 CCDC115Q96NT0 180 aa17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 HS3ST6Q96QI5 342 aa17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 WDR45Q9Y484 360 aa17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 ZNF469Q96JG9 3925 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-212ENST00000539372 DIAPH2O60879 1101 aa17■□□□□ 0.31
TNFRSF1A-212ENST00000539372 SNNO75324 88 aaPredicted RBP17■□□□□ 0.31
TNFRSF1A-212ENST00000539372 BCAS1O75363 584 aaPredicted RBP17■□□□□ 0.31
TNFRSF1A-212ENST00000539372 AGR2O95994 175 aa17■□□□□ 0.31
TNFRSF1A-212ENST00000539372 THBDP07204 575 aa17■□□□□ 0.31
TNFRSF1A-212ENST00000539372 PABPC4LP0CB38 370 aaKnown RBP17■□□□□ 0.31
TNFRSF1A-212ENST00000539372 SLC7A1P30825 629 aa17■□□□□ 0.31
TNFRSF1A-212ENST00000539372 TIGD2Q4W5G0 525 aa17■□□□□ 0.31
TNFRSF1A-212ENST00000539372 SLC25A53Q5H9E4 307 aa17■□□□□ 0.31
TNFRSF1A-212ENST00000539372 TMEM201Q5SNT2 666 aa17■□□□□ 0.31
TNFRSF1A-212ENST00000539372 EIF3MQ7L2H7 374 aaKnown RBP17■□□□□ 0.31
TNFRSF1A-212ENST00000539372 NUFIP2Q7Z417 695 aaKnown RBP17■□□□□ 0.31
TNFRSF1A-212ENST00000539372 STK32CQ86UX6 486 aa17■□□□□ 0.31
TNFRSF1A-212ENST00000539372 RNF130Q86XS8 419 aa17■□□□□ 0.31
TNFRSF1A-212ENST00000539372 TUSC5Q8IXB3 177 aa17■□□□□ 0.31
TNFRSF1A-212ENST00000539372 MARK4Q96L34 752 aa17■□□□□ 0.31
TNFRSF1A-212ENST00000539372 INPP5KQ9BT40 448 aa17■□□□□ 0.31
TNFRSF1A-212ENST00000539372 UBTD1Q9HAC8 227 aa17■□□□□ 0.31
TNFRSF1A-212ENST00000539372 BTNL2Q9UIR0 455 aa17■□□□□ 0.31
TNFRSF1A-212ENST00000539372 PRAMEF27A3QJZ7 478 aa16.99■□□□□ 0.31
TNFRSF1A-212ENST00000539372 TRPC5OSA6NMA1 111 aa16.99■□□□□ 0.31
TNFRSF1A-212ENST00000539372 HDAC3O15379 428 aa16.99■□□□□ 0.31
TNFRSF1A-212ENST00000539372 ENPP1P22413 925 aa16.99■□□□□ 0.31
TNFRSF1A-212ENST00000539372 SESN3P58005 492 aa16.99■□□□□ 0.31
TNFRSF1A-212ENST00000539372 MERTKQ12866 999 aa16.99■□□□□ 0.31
TNFRSF1A-212ENST00000539372 RNPS1Q15287 305 aaKnown RBP16.99■□□□□ 0.31
TNFRSF1A-212ENST00000539372 GPAT3Q53EU6 434 aa16.99■□□□□ 0.31
TNFRSF1A-212ENST00000539372 NXNQ6DKJ4 435 aa16.99■□□□□ 0.31
TNFRSF1A-212ENST00000539372 FRRS1Q6ZNA5 592 aa16.99■□□□□ 0.31
TNFRSF1A-212ENST00000539372 BEND4Q6ZU67 534 aa16.99■□□□□ 0.31
TNFRSF1A-212ENST00000539372 ZG16BQ96DA0 208 aa16.99■□□□□ 0.31
TNFRSF1A-212ENST00000539372 OR52E6Q96RD3 313 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms