RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 RPS5P46782 204 aaKnown RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 NOVA1P51513 510 aaKnown RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 EFNA3P52797 238 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 CDH12P55289 794 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 OR2B6P58173 313 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 MRPS15P82914 257 aaKnown RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 PSG6Q00889 435 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 PIGFQ07326 219 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 RIPPLY1Q0D2K3 151 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 STX4Q12846 297 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 EIF3IQ13347 325 aaKnown RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 PIN1Q13526 163 aaPredicted RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 ERV3-1Q14264 604 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 TBCEQ15813 527 aaPredicted RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 MICAQ29983 383 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 TIMM50Q3ZCQ8 353 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 NKAIN1Q4KMZ8 207 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 DCST2Q5T1A1 773 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 ARHGAP40Q5TG30 622 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 MLIPQ5VWP3 458 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 ZNF385CQ66K41 422 aaPredicted RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 ZNF770Q6IQ21 691 aaPredicted RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 XKRXQ6PP77 449 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 CCBE1Q6UXH8 406 aaPredicted RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 UBQLNLQ8IYU4 475 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 CLIP4Q8N3C7 705 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 ZNF615Q8N8J6 731 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 IL17RDQ8NFM7 739 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 OR52R1Q8NGF1 315 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 OR6F1Q8NGZ6 308 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 SLC9A6Q92581 669 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 MYDGFQ969H8 173 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 PITX2Q99697 317 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 ULBP3Q9BZM4 244 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 MKKSQ9NPJ1 570 aaPredicted RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 SLC22A11Q9NSA0 550 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 PDP1Q9P0J1 537 aaPredicted RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 A4GNTQ9UNA3 340 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 MSRB2Q9Y3D2 182 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 WDR45Q9Y484 360 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 GMPPBQ9Y5P6 360 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 B3GALT1Q9Y5Z6 326 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 TCRBV16S1A1N1A0A5B0 115 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 OR2W5A6NFC9 320 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 HRKO00198 91 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 MEN1O00255 615 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 SLC30A4O14863 429 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 BRINP1O60477 761 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 FCMRO60667 390 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 PRAMEF2O60811 474 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 STX11O75558 287 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 GADD45GO95257 159 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 MT-ND2P03891 347 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 JMJD7P0C870 316 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 ANXA8P13928 327 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 M6PRP20645 277 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 TRHRP34981 398 aaPredicted RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 TGFBR2P37173 567 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 MAP2K4P45985 399 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 BPIFB3P59826 476 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 EEF1A1P68104 462 aaKnown RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 POU6F2P78424 691 aaPredicted RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 DCDP81605 110 aaKnown RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 ZNF155Q12901 538 aaPredicted RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 RAPSNQ13702 412 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 DGCR6Q14129 220 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 LAPTM4AQ15012 233 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 MAD2L1BPQ15013 274 aaPredicted RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 C21orf62-AS1Q17RA5 79 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 EXOC3L2Q2M3D2 409 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 VWA2Q5GFL6 755 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 COLEC12Q5KU26 742 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 DCAF12Q5T6F0 453 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 CCDC81Q6ZN84 652 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 SNX29P2Q8IUI4 249 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 ZNF619Q8N2I2 560 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 PARP16Q8N5Y8 322 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 COX18Q8N8Q8 333 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 PLPP5Q8NEB5 264 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 CNIH3Q8TBE1 160 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 NR4A3Q92570 626 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 ZG16BQ96DA0 208 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 RBM18Q96H35 190 aaKnown RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 PRRC1Q96M27 445 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 C6orf62Q9GZU0 229 aaPredicted RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 NUAK2Q9H093 628 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 NMNAT1Q9HAN9 279 aaPredicted RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 PLCXD1Q9NUJ7 323 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 DDX28Q9NUL7 540 aaKnown RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 CTSFQ9UBX1 484 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 PISDQ9UG56 409 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 NDRG4Q9ULP0 352 aaKnown RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 RNF6Q9Y252 685 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 ZNF443Q9Y2A4 671 aaPredicted RBP8.17□□□□□ -1.1
DDB1-213ENST00000539332 N6AMT1Q9Y5N5 214 aa8.17□□□□□ -1.1
DDB1-213ENST00000539332 MPDZO75970 2070 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 GXYLT2A0PJZ3 443 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 NPIPB9F8W1W9 429 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 M0R3H8 397 aa8.16□□□□□ -1.1
DDB1-213ENST00000539332 XPNPEP2O43895 674 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms