RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 RIPK2O43353 540 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 BCAS2O75934 225 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-209ENST00000539197 IGHV3-48P01763 117 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 ALPPP05187 535 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 HBQ1P09105 142 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 ALPPL2P10696 532 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 PDHBP11177 359 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 DLSTP36957 453 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 APOC4P55056 127 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 CSTF1Q05048 431 aaKnown RBP2.42□□□□□ -2.02
CCDC7-209ENST00000539197 GABPB1Q06547 395 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-209ENST00000539197 AP1B1Q10567 949 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 ST3GAL3Q11203 375 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 FAM74A3Q4VXF1 159 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 LDLRAP1Q5SW96 308 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 FAM120AOSQ5T036 256 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 LANCL3Q6ZV70 420 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 C1orf186Q6ZWK4 172 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 VRK2Q86Y07 508 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 ZNF547Q8IVP9 402 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 KDM8Q8N371 416 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 MTURNQ8N3F0 131 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 RNF148Q8N7C7 305 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 OR56B1Q8NGI3 324 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 SLC5A11Q8WWX8 675 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 OR5B2Q96R09 309 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 ARHGDIGQ99819 225 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 SLC30A2Q9BRI3 323 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 TBCDQ9BTW9 1192 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 ING2Q9H160 280 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 ROPN1Q9HAT0 212 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-209ENST00000539197 PLGRKTQ9HBL7 147 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 XPO7Q9UIA9 1087 aaKnown RBP2.42□□□□□ -2.02
CCDC7-209ENST00000539197 RIMS3Q9UJD0 308 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 SPAG9O60271 1321 aaKnown RBP2.42□□□□□ -2.02
CCDC7-209ENST00000539197 TTC21BQ7Z4L5 1316 aa2.42□□□□□ -2.02
CCDC7-209ENST00000539197 PSMB11A5LHX3 300 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 K7N7A8 449 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 FCN1O00602 326 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 CLUP10909 449 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 XRCC1P18887 633 aaPredicted RBP2.41□□□□□ -2.02
CCDC7-209ENST00000539197 CALB2P22676 271 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 AQP1P29972 269 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 PRDX3P30048 256 aaKnown RBP2.41□□□□□ -2.02
CCDC7-209ENST00000539197 NMT1P30419 496 aaKnown RBP2.41□□□□□ -2.02
CCDC7-209ENST00000539197 CCR6P51684 374 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 PLK1P53350 603 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 NAPAP54920 295 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 NDUFA9Q16795 377 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 RABGAP1LQ5R372 815 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 LIPNQ5VXI9 398 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 NEK5Q6P3R8 708 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 CYS1Q717R9 158 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 FAM220AQ7Z4H9 259 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 FAM71CQ8NEG0 241 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 OR52I1Q8NGK6 324 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 ZNF596Q8TC21 504 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 UCN3Q969E3 161 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 TMEM186Q96B77 213 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 HPDLQ96IR7 371 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 VSTM2LQ96N03 204 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 MAGT1Q9H0U3 335 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 MRPL39Q9NYK5 338 aaKnown RBP2.41□□□□□ -2.02
CCDC7-209ENST00000539197 MOSPD1Q9UJG1 213 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 RNF6Q9Y252 685 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 ABCC4O15439 1325 aa2.41□□□□□ -2.02
CCDC7-209ENST00000539197 A0A0U1RQS6 177 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 RNF222A6NCQ9 220 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 SNAPINO95295 136 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 BAG2O95816 211 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 DPP4P27487 766 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 CSNK1G2P78368 415 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 CHRNB3Q05901 458 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 SLAQ13239 276 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 GAMTQ14353 236 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 PAGE3Q5JUK9 113 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 ATF7IP2Q5U623 682 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 ARSKQ6UWY0 536 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 CNIH3Q8TBE1 160 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 PIGCQ92535 297 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 FAM210BQ96KR6 192 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 SRXN1Q9BYN0 137 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 RAB17Q9H0T7 212 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 ZDHHC4Q9NPG8 344 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 YAE1D1Q9NRH1 226 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 TBX21Q9UL17 535 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 ZNF835Q9Y2P0 537 aa2.4□□□□□ -2.03
CCDC7-209ENST00000539197 A0A096LNJ9 63 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 FAM230AA0A1W2PPH8 454 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 GJE1A6NN92 205 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 ANKRD30BLA7E2S9 258 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 TOM1L1O75674 476 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 CA3P07451 260 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 ZNF286BP0CG31 522 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 FUT7Q11130 342 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 PDK1Q15118 436 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 ADPRMQ3LIE5 342 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 DNAJC21Q5F1R6 531 aaKnown RBP2.39□□□□□ -2.03
CCDC7-209ENST00000539197 UNQ9370/PRO34162Q6UXP9 181 aa2.39□□□□□ -2.03
CCDC7-209ENST00000539197 ZNF836Q6ZNA1 936 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms