RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MXD4Q14582 209 aaPredicted RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 IZUMO4Q1ZYL8 232 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 AGKQ53H12 422 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 EIPR1Q53HC9 387 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 UNC50Q53HI1 259 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 FFAR4Q5NUL3 377 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ADAMTSL4-AS1Q5T5F5 129 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 C1orf185Q5T7R7 199 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 REP15Q6BDI9 236 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CDC42EP5Q6NZY7 148 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 TOM1L2Q6ZVM7 507 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 BIVMQ86UB2 503 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 SPATA24Q86W54 205 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 APOBEC3FQ8IUX4 373 aaKnown RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 APRG1Q8IVJ8 170 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 MISPQ8IVT2 679 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 H1FOOQ8IZA3 346 aaPredicted RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 LRRC17Q8N6Y2 441 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 TMEM178AQ8NBL3 297 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 BHLHE23Q8NDY6 225 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF461Q8TAF7 563 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 NEIL3Q8TAT5 605 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 UBA3Q8TBC4 463 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 AENQ8WTP8 325 aaKnown RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 STMN2Q93045 179 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 TMEM80Q96HE8 168 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 POM121L2Q96KW2 1035 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 B3GALT6Q96L58 329 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 Q96MT0 163 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 TGM7Q96PF1 710 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CTAGE1Q96RT6 745 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 RIOK2Q9BVS4 552 aaKnown RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 TMEM117Q9H0C3 514 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 RPP21Q9H633 154 aaKnown RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 FANCEQ9HB96 536 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 C3orf14Q9HBI5 128 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 MEPEQ9NQ76 525 aaPredicted RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 SPHK2Q9NRA0 654 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 TREX1Q9NSU2 369 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 KLK11Q9UBX7 282 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CRCT1Q9UGL9 99 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ATP6V1HQ9UI12 483 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 PDE10AQ9Y233 779 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 WDR19Q8NEZ3 1342 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 DNAH1Q9P2D7 4330 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF608Q9ULD9 1512 aaPredicted RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 IGLV7-46A0A075B6I9 117 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 A0A1B0GWB2 263 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 LOC390937A0A1W2PQ73 354 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF233A6NK53 670 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 IQCF5A8MTL0 148 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 KRTAP4-16G5E9R7 235 aaPredicted RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 GOLGA8SH3BPF8 625 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 XPO1O14980 1071 aaKnown RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 BET1O15155 118 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 SLC31A2O15432 143 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 SOX15O60248 233 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 LMX1BO60663 402 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 TSC22D2O75157 780 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 VPS26AO75436 327 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CA1P00915 261 aaPredicted RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 MX1P20591 662 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 GLRA2P23416 452 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 IL32P24001 234 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CASQ1P31415 396 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CDKN1BP46527 198 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 NPY2RP49146 381 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 SLC11A1P49279 550 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 DUSP3P51452 185 aaPredicted RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 NOVA1P51513 510 aaKnown RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 GBX2P52951 348 aaPredicted RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 HSPA2P54652 639 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 OSTNP61366 133 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ERVK-25P63136 954 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 DPYSL3Q14195 570 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 NCF4Q15080 339 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 VAX1Q5SQQ9 334 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 LHFPL4Q7Z7J7 247 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 SLC7A5P1Q8MH63 180 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 THEM5Q8N1Q8 247 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ARFGAP2Q8N6H7 521 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ZSCAN4Q8NAM6 433 aaPredicted RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 DDHD1Q8NEL9 900 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 OR4Q3Q8NH05 313 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 FGF14Q92915 247 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 C8orf44Q96CB5 159 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 MAGED4Q96JG8 741 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 SLC45A3Q96JT2 553 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 AGAP4Q96P64 663 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 NPY6RQ99463 290 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 LITAFQ99732 161 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 SH3GL1Q99961 368 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 LRRCC1Q9C099 1032 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 DPEP2Q9H4A9 486 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF696Q9H7X3 374 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 IL1RL2Q9HB29 575 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CD209Q9NNX6 404 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 PLEK2Q9NYT0 353 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 P2RX2Q9UBL9 471 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 PTBP2Q9UKA9 531 aaKnown RBP0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms