RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 EID3Q8N140 333 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 ZCCHC7Q8N3Z6 543 aaKnown RBP6.63□□□□□ -1.35
MSH6-209ENST00000538136 OR9Q1Q8NGQ5 310 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 UBTD2Q8WUN7 234 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 DDA1Q9BW61 102 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 UGT2B28Q9BY64 529 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 ASCL3Q9NQ33 180 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 CMTM6Q9NX76 183 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 DNAJB11Q9UBS4 358 aa6.63□□□□□ -1.35
MSH6-209ENST00000538136 MCTS1Q9ULC4 181 aaKnown RBP6.63□□□□□ -1.35
MSH6-209ENST00000538136 F8P00451 2351 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 C2CD3Q4AC94 2353 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 FAM183AA6NL82 134 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 GSC2O15499 205 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 MSL3P1P0C860 447 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 ENPP1P22413 925 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 EMDP50402 254 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 NR1D2Q14995 579 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 PRSS53Q2L4Q9 553 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 PDCD4Q53EL6 469 aaKnown RBP6.62□□□□□ -1.35
MSH6-209ENST00000538136 HBMQ6B0K9 141 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 TMEM200AQ86VY9 491 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 OR9Q2Q8NGE9 314 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 ZNF559Q9BR84 538 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 MTHFD2LQ9H903 347 aaPredicted RBP6.62□□□□□ -1.35
MSH6-209ENST00000538136 SMURF2Q9HAU4 748 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 MED29Q9NX70 200 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 ABCG2Q9UNQ0 655 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 PCDHGA8Q9Y5G5 932 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.62□□□□□ -1.35
MSH6-209ENST00000538136 ZNF354AO60765 605 aaPredicted RBP6.62□□□□□ -1.35
MSH6-209ENST00000538136 BCL10O95999 233 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 FABP3P05413 133 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 GNLYP22749 145 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 EVI2BP34910 448 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 NAA10P41227 235 aaPredicted RBP6.62□□□□□ -1.35
MSH6-209ENST00000538136 ATP12AP54707 1039 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 GABPB1Q06547 395 aaPredicted RBP6.62□□□□□ -1.35
MSH6-209ENST00000538136 DGCR6Q14129 220 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 SPRED3Q2MJR0 410 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 BATF2Q8N1L9 274 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 OR6T1Q8NGN1 323 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 SNRNP40Q96DI7 357 aaKnown RBP6.62□□□□□ -1.35
MSH6-209ENST00000538136 ALKBH3Q96Q83 286 aaPredicted RBP6.62□□□□□ -1.35
MSH6-209ENST00000538136 BTBD2Q9BX70 525 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 CADM1Q9BY67 442 aaKnown RBP6.62□□□□□ -1.35
MSH6-209ENST00000538136 POLR2J3Q9H1A7 115 aaKnown RBP6.62□□□□□ -1.35
MSH6-209ENST00000538136 CLMPQ9H6B4 373 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 YY1AP1Q9H869 796 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 MED31Q9Y3C7 131 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 SERINC4A6NH21 518 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 FBP2O00757 339 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 RAD51DO75771 328 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 CHRM4P08173 479 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 PATE4P0C8F1 98 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 UGT2B15P54855 530 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 ERVK-25P63136 954 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 FOXF1Q12946 379 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 DUSP8Q13202 625 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 CD226Q15762 336 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 ALKBH6Q3KRA9 238 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 HEPHL1Q6MZM0 1159 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 ZNF517Q6ZMY9 492 aaPredicted RBP6.62□□□□□ -1.35
MSH6-209ENST00000538136 JAZF1Q86VZ6 243 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.62□□□□□ -1.35
MSH6-209ENST00000538136 SLC34A3Q8N130 599 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 ZNF786Q8N393 782 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 ABTB1Q969K4 478 aaPredicted RBP6.62□□□□□ -1.35
MSH6-209ENST00000538136 IP6K3Q96PC2 410 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 HOPXQ9BPY8 73 aaPredicted RBP6.62□□□□□ -1.35
MSH6-209ENST00000538136 POLDIP3Q9BY77 421 aaKnown RBP6.62□□□□□ -1.35
MSH6-209ENST00000538136 WDR76Q9H967 626 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 TBC1D23Q9NUY8 699 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 SIDT1Q9NXL6 827 aaKnown RBP6.62□□□□□ -1.35
MSH6-209ENST00000538136 SLC7A8Q9UHI5 535 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 BTNL2Q9UIR0 455 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 CORO2BQ9UQ03 480 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 POMPQ9Y244 141 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 FLNCQ14315 2725 aa6.62□□□□□ -1.35
MSH6-209ENST00000538136 MEX3AA1L020 520 aaKnown RBP6.61□□□□□ -1.35
MSH6-209ENST00000538136 TVP23AA6NH52 213 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 MRPL33O75394 65 aaKnown RBP6.61□□□□□ -1.35
MSH6-209ENST00000538136 ATP5HO75947 161 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 LYZL6O75951 148 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 H1F0P07305 194 aaKnown RBP6.61□□□□□ -1.35
MSH6-209ENST00000538136 C17orf67Q0P5P2 114 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 KIAA0040Q15053 153 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 NIPAL3Q6P499 406 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 AAGABQ6PD74 315 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 COX15Q7KZN9 410 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 SHFQ7M4L6 423 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 ZNF550Q7Z398 422 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 PATL1Q86TB9 770 aaKnown RBP6.61□□□□□ -1.35
MSH6-209ENST00000538136 PLCZ1Q86YW0 608 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 FAM86B1Q8N7N1 296 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 AQP11Q8NBQ7 271 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 BHLHE23Q8NDY6 225 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 BPIFB6Q8NFQ5 453 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 ERMAPQ96PL5 475 aaPredicted RBP6.61□□□□□ -1.35
MSH6-209ENST00000538136 SERHL2Q9H4I8 314 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms