RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 NME6O75414 186 aaPredicted RBP11.01□□□□□ -0.65
CAPN1-223ENST00000533079 ATP5HO75947 161 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 UTS2O95399 124 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 ADAP00813 363 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 ARFIP2P53365 341 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 TSC22D1Q15714 1073 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 PLPPR5Q32ZL2 321 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 SGO1Q5FBB7 561 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 CPTPQ5TA50 214 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 FAM91A1Q658Y4 838 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 TMEM108Q6UXF1 575 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 MISPQ8IVT2 679 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 FBXL14Q8N1E6 418 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 OR2L13Q8N349 312 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 SLC43A2Q8N370 569 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 MUC15Q8N387 334 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 ARIH2OSQ8N7S6 290 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 ABHD3Q8WU67 409 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 ZMYND19Q96E35 227 aaPredicted RBP11.01□□□□□ -0.65
CAPN1-223ENST00000533079 DHRS9Q9BPW9 319 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 LMF2Q9BU23 707 aaKnown RBP11.01□□□□□ -0.65
CAPN1-223ENST00000533079 TRMOQ9BU70 441 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 GATA5Q9BWX5 397 aaPredicted RBP11.01□□□□□ -0.65
CAPN1-223ENST00000533079 C20orf27Q9GZN8 174 aa11.01□□□□□ -0.65
CAPN1-223ENST00000533079 FARSBQ9NSD9 589 aaKnown RBP11.01□□□□□ -0.65
CAPN1-223ENST00000533079 DDX18Q9NVP1 670 aaKnown RBP11.01□□□□□ -0.65
CAPN1-223ENST00000533079 C19orf53Q9UNZ5 99 aaPredicted RBP11.01□□□□□ -0.65
CAPN1-223ENST00000533079 GNG14A0A1W2PPG7 69 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 A0A1W2PRB8 838 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 SLCO1B7G3V0H7 640 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 TCF21O43680 179 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 SMIM24O75264 130 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 PRKD3O94806 890 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 YES1P07947 543 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 RPS17P08708 135 aaKnown RBP11□□□□□ -0.65
CAPN1-223ENST00000533079 COX5AP20674 150 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 IMPDH1P20839 514 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 EIF1P41567 113 aaKnown RBP11□□□□□ -0.65
CAPN1-223ENST00000533079 CARD18P57730 90 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 STK11Q15831 433 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 ZNF544Q6NX49 715 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 LETMD1Q6P1Q0 360 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 NUFIP2Q7Z417 695 aaKnown RBP11□□□□□ -0.65
CAPN1-223ENST00000533079 TUSC5Q8IXB3 177 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 OSTF1Q92882 214 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 PHF21BQ96EK2 531 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 NSUN5Q96P11 429 aaKnown RBP11□□□□□ -0.65
CAPN1-223ENST00000533079 LRRC37BQ96QE4 947 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 BBS4Q96RK4 519 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 SORT1Q99523 831 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 PLA2G12AQ9BZM1 189 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 CHODLQ9H9P2 273 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 BCO1Q9HAY6 547 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 NPHS2Q9NP85 383 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 SAR1AQ9NR31 198 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 MED17Q9NVC6 651 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 RAP2CQ9Y3L5 183 aa11□□□□□ -0.65
CAPN1-223ENST00000533079 MYO1GB0I1T2 1018 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 NDUFB5O43674 189 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 ITM2AO43736 263 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 GMFGO60234 142 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 GGT1P19440 569 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 PTAFRP25105 342 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 LCN1P31025 176 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 OR3A2P47893 321 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 NCBP2P52298 156 aaKnown RBP eCLIP10.99□□□□□ -0.65
CAPN1-223ENST00000533079 EFNA4P52798 201 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 BNIP1Q12981 228 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 GRAMD1BQ3KR37 738 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 VPS26BQ4G0F5 336 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 METTL21CQ5VZV1 264 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 GALNT18Q6P9A2 607 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 TMEM107Q6UX40 140 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 APOOLQ6UXV4 268 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 Q6ZSR9 355 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 FCRLAQ7L513 359 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 HOMEZQ8IX15 550 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 LILRA2Q8N149 483 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 PIAS4Q8N2W9 510 aaPredicted RBP10.99□□□□□ -0.65
CAPN1-223ENST00000533079 FITM2Q8N6M3 262 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 CDYL2Q8N8U2 506 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 SLC9A6Q92581 669 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 L3HYPDHQ96EM0 354 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 C1QTNF3Q9BXJ4 246 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 TMEM185BQ9H7F4 350 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 KLHL9Q9P2J3 617 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 POU2F3Q9UKI9 436 aa10.99□□□□□ -0.65
CAPN1-223ENST00000533079 LOC100289279A0A1B0GTE1 492 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 OR5H1A6NKK0 313 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 ZNF814B7Z6K7 855 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 UPK1AO00322 258 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 ZNF195O14628 629 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 HNRNPCL1O60812 293 aaKnown RBP10.98□□□□□ -0.65
CAPN1-223ENST00000533079 CCDC22O60826 627 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 LYZL6O75951 148 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 PGM3O95394 542 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 OXSR1O95747 527 aaPredicted RBP10.98□□□□□ -0.65
CAPN1-223ENST00000533079 KRT6AP02538 564 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 KRT6BP04259 564 aa10.98□□□□□ -0.65
CAPN1-223ENST00000533079 DDCP20711 480 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms