RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	GORASP2	Q9H8Y8	452 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	SH3BGRL2	Q9UJC5	107 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	NUBP2	Q9Y5Y2	271 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	GPR45	Q9Y5Y3	372 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	CDC14C	A4D256	554 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	TF	P02787	698 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	CHRM4	P08173	479 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	MSL3P1	P0C860	447 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	OR1Q1	Q15612	314 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	RPE65	Q16518	533 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	MARCH8	Q5T0T0	291 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	PODNL1	Q6PEZ8	512 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	OPN5	Q6U736	354 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	IL17RD	Q8NFM7	739 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	OR5L1	Q8NGL2	311 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	OR51Q1	Q8NH59	317 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	BORCS7	Q96B45	105 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	C4orf36	Q96KX1	117 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	NENF	Q9UMX5	172 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	HTR2B	P41595	481 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	MAGEA6	P43360	314 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	RGR	P47804	291 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	NOV	P48745	357 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	SNRPD2	P62316	118 aa	Known RBP	18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	SLC29A1	Q99808	456 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	CLMP	Q9H6B4	373 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	PISD	Q9UG56	409 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	CA5B	Q9Y2D0	317 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	LRP6	O75581	1613 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	CD300LB	A8K4G0	201 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	LILRB5	O75023	590 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	WDPCP	O95876	746 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	IGHG1	P01857	330 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	HLA-F	P30511	346 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	GJA5	P36382	358 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	ADGRG5	Q8IZF4	528 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	SMIM14	Q96QK8	99 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	HHLA2	Q9UM44	414 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	CAMK2A	Q9UQM7	478 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	DLG5	Q8TDM6	1919 aa		18.32	■□□□□ 0.52
FGFR1-238	ENST00000532791	UBFD1	O14562	309 aa	Known RBP	18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	SEC61A1	P61619	476 aa	Known RBP	18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	ERV3-1	Q14264	604 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	MBTPS1	Q14703	1052 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	ZNF322	Q6U7Q0	402 aa	Predicted RBP	18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	OR4K15	Q8NH41	348 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	USP3	Q9Y6I4	520 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	DCAF7	P61962	342 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	OR5M10	Q6IEU7	315 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	ATPIF1	Q9UII2	106 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	HCFC2	Q9Y5Z7	792 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	MEIS3P1	A6NDR6	274 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	ARPC5	O15511	151 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	WDSUB1	Q8N9V3	476 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	ARRDC2	Q8TBH0	407 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	PFDN5	Q99471	154 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	RLIM	Q9NVW2	624 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	BOLA2-SMG1P6	H3BVE0	249 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	GAA	P10253	952 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	GJA4	P35212	333 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	AHR	P35869	848 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	ZNF136	P52737	540 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	PCBD1	P61457	104 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	MRPS21	P82921	87 aa	Known RBP	18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	ELP2	Q6IA86	826 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	SERPINA12	Q8IW75	414 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	FOXRED1	Q96CU9	486 aa	Predicted RBP	18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	OR51E2	Q9H255	320 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	LHX3	Q9UBR4	397 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	SRPX2	O60687	465 aa	Predicted RBP	18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	BCAS1	O75363	584 aa	Predicted RBP	18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	HOXD9	P28356	352 aa	Predicted RBP	18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	MRPS10	P82664	201 aa	Known RBP	18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	ZP2	Q05996	745 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	MEPCE	Q7L2J0	689 aa	Known RBP	18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	TMEM163	Q8TC26	289 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	INSM2	Q96T92	566 aa	Predicted RBP	18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	ASF1B	Q9NVP2	202 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	HSFX1	Q9UBD0	423 aa		18.31	■□□□□ 0.52
FGFR1-238	ENST00000532791	PPP6C	O00743	305 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	DLST	P36957	453 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	POU3F1	Q03052	451 aa	Predicted RBP	18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	TECPR1	Q7Z6L1	1165 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	CNTN4	Q8IWV2	1026 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	C3orf30	Q96M34	536 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	FOXN4	Q96NZ1	517 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	ARNT2	Q9HBZ2	717 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	AGPAT4	Q9NRZ5	378 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	BOK	Q9UMX3	212 aa	Predicted RBP	18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	EDN1	P05305	212 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	CD53	P19397	219 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	BDKRB2	P30411	391 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	CX3CR1	P49238	355 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	LSAMP	Q13449	338 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	PGGHG	Q32M88	737 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	DNAJC22	Q8N4W6	341 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	EID2	Q8N6I1	236 aa		18.3	■□□□□ 0.52
FGFR1-238	ENST00000532791	MFSD9	Q8NBP5	474 aa		18.3	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms