RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ZNF117Q03924 483 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 SLC25A53Q5H9E4 307 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 ANXA8L1Q5VT79 327 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 CGB2Q6NT52 195 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 PPP4R4Q6NUP7 873 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 C6orf89Q6UWU4 347 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 C20orf204Q6ZNR8 217 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 C6orf120Q7Z4R8 191 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 YTHDF3Q7Z739 585 aaKnown RBP12.7□□□□□ -0.38
CAPN1-212ENST00000527887 SLC43A2Q8N370 569 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 KRTCAP2Q8N6L1 136 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 OR5W2Q8NH69 310 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 GPR119Q8TDV5 335 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 ARSGQ96EG1 525 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 OTUB1Q96FW1 271 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-212ENST00000527887 MRGPRX4Q96LA9 322 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 OR7D2Q96RA2 312 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 SDF2Q99470 211 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 USB1Q9BQ65 265 aaKnown RBP12.7□□□□□ -0.38
CAPN1-212ENST00000527887 TACO1Q9BSH4 297 aaKnown RBP12.7□□□□□ -0.38
CAPN1-212ENST00000527887 HDHD5Q9BXW7 423 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 DLL4Q9NR61 685 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 EXD2Q9NVH0 621 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 C6orf203Q9P0P8 240 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-212ENST00000527887 CARD8Q9Y2G2 431 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 GPR52Q9Y2T5 361 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 A0A1W2PPR1 153 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 ETV2O00321 342 aaPredicted RBP12.69□□□□□ -0.38
CAPN1-212ENST00000527887 ZNF264O43296 627 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 STX11O75558 287 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 PSMB1P20618 241 aaKnown RBP12.69□□□□□ -0.38
CAPN1-212ENST00000527887 MATN1P21941 496 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 CCKARP32238 428 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 RPL14P50914 215 aaKnown RBP12.69□□□□□ -0.38
CAPN1-212ENST00000527887 NR1H2P55055 460 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 CBFBQ13951 182 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 ACKR1Q16570 336 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 DPY19L1Q2PZI1 675 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 PGS1Q32NB8 556 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 BEX5Q5H9J7 111 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 AP1ARQ63HQ0 302 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 CBLN3Q6UW01 205 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 MIPOL1Q8TD10 442 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 TESCQ96BS2 214 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 PIK3IP1Q96FE7 263 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 MARK4Q96L34 752 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 SORT1Q99523 831 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 NPAS1Q99742 590 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 DPY30Q9C005 99 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 KLHL4Q9C0H6 718 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 ZNF395Q9H8N7 513 aaPredicted RBP12.69□□□□□ -0.38
CAPN1-212ENST00000527887 AKTIPQ9H8T0 292 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 POLE3Q9NRF9 147 aa12.69□□□□□ -0.38
CAPN1-212ENST00000527887 FLNAP21333 2647 aaKnown RBP12.68□□□□□ -0.38
CAPN1-212ENST00000527887 PRSS51A0A1B0GVH4 220 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 SERINC4A6NH21 518 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 ITM2AO43736 263 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 TMCC2O75069 709 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 DCTN3O75935 186 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 NTN1O95631 604 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 UBL4AP11441 157 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 NID1P14543 1247 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 PRKCAP17252 672 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 SOAT1P35610 550 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 CLNS1AP54105 237 aaKnown RBP12.68□□□□□ -0.38
CAPN1-212ENST00000527887 NKX6-1P78426 367 aaPredicted RBP12.68□□□□□ -0.38
CAPN1-212ENST00000527887 FOXF1Q12946 379 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 SELENBP1Q13228 472 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 ZNF141Q15928 474 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 ZNF239Q16600 458 aaKnown RBP12.68□□□□□ -0.38
CAPN1-212ENST00000527887 EXOC3L2Q2M3D2 409 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 ARHGAP11BQ3KRB8 267 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 TMEM201Q5SNT2 666 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.68□□□□□ -0.38
CAPN1-212ENST00000527887 PRSS57Q6UWY2 283 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 STAC2Q6ZMT1 411 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 CXorf67Q86X51 503 aaPredicted RBP12.68□□□□□ -0.38
CAPN1-212ENST00000527887 ZNF781Q8N8C0 355 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 FBXO27Q8NI29 283 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 RNF128Q8TEB7 428 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 C20orf27Q9GZN8 174 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 LAT2Q9GZY6 243 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 TMEM185BQ9H7F4 350 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 MRGBPQ9NV56 204 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 CLEC4AQ9UMR7 237 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 KCNE3Q9Y6H6 103 aa12.68□□□□□ -0.38
CAPN1-212ENST00000527887 RNF103-CHMP3A0A140T963 221 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 SIAH2O43255 324 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 DNAJA2O60884 412 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 SMPD2O60906 423 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 PRKD3O94806 890 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 OPN1LWP04000 364 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 UQCRC2P22695 453 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 FKBP2P26885 142 aaKnown RBP12.67□□□□□ -0.38
CAPN1-212ENST00000527887 AGTR1P30556 359 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 SFTPDP35247 375 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 RAC3P60763 192 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 TXNL4AP83876 142 aaKnown RBP12.67□□□□□ -0.38
CAPN1-212ENST00000527887 PDCD2Q16342 344 aaPredicted RBP12.67□□□□□ -0.38
CAPN1-212ENST00000527887 TMEM176BQ3YBM2 270 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms