RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 HUS1BQ8NHY5 278 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 RDH11Q8TC12 318 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 AGR3Q8TD06 166 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF473Q8WTR7 871 aaKnown RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 ATL1Q8WXF7 558 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 CNOT9Q92600 299 aaKnown RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 ZUFSPQ96AP4 578 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 SLC22A18Q96BI1 424 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 ZC3HAV1LQ96H79 300 aaKnown RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 SMIM10Q96HG1 83 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF382Q96SR6 550 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 CD180Q99467 661 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 NTMT1Q9BV86 223 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 MS4A8Q9BY19 250 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF717Q9BY31 904 aaPredicted RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 CHRNA10Q9GZZ6 450 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 DRC3Q9H069 523 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF696Q9H7X3 374 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 PELI2Q9HAT8 420 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 PDE7BQ9NP56 450 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 SLCO1B3Q9NPD5 702 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 FGF21Q9NSA1 209 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 SOHLH2Q9NX45 425 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 SENP1Q9P0U3 644 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 DHCR7Q9UBM7 475 aaKnown RBP2.71□□□□□ -1.98
CSDE1-208ENST00000524652 GIMAP2Q9UG22 337 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 PISDQ9UG56 409 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 LNPEPQ9UIQ6 1025 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 FIS1Q9Y3D6 152 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 LOXL2Q9Y4K0 774 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 CCL27Q9Y4X3 112 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 HEATR5AQ86XA9 2040 aa2.71□□□□□ -1.98
CSDE1-208ENST00000524652 JMJD1CQ15652 2540 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 LOC101059948A0A1B0GTJ6 334 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 LRIT2A6NDA9 550 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 TRABD2BA6NFA1 517 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF860A6NHJ4 632 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 GOLGA6L10A6NI86 522 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 FAM90A7PA6NKC0 464 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 WASHC1A8K0Z3 465 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 FAM90A22PA8MWA6 464 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 FAM90A12PA8MX19 464 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 FAM90A23PA8MXZ1 464 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 B4E171 279 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 MANBAO00462 879 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 PLPP1O14494 284 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 POLR1CO15160 346 aaPredicted RBP2.7□□□□□ -1.98
CSDE1-208ENST00000524652 BIRC5O15392 142 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 NDUFS4O43181 175 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 ZW10O43264 779 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 ATP8B1O43520 1251 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 OR1F1O43749 312 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 EEDO75530 441 aaKnown RBP2.7□□□□□ -1.98
CSDE1-208ENST00000524652 PRKRAO75569 313 aaKnown RBP2.7□□□□□ -1.98
CSDE1-208ENST00000524652 SCRG1O75711 98 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 RSL1D1O76021 490 aaKnown RBP2.7□□□□□ -1.98
CSDE1-208ENST00000524652 KIAA0754O94854 1291 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 TNFSF15O95150 251 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 CLDN9O95484 217 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 AMBPP02760 352 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 GBAP04062 536 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 EIF2S1P05198 315 aaKnown RBP2.7□□□□□ -1.98
CSDE1-208ENST00000524652 FGF4P08620 206 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 HLA-DOBP13765 273 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 EZRP15311 586 aaKnown RBP2.7□□□□□ -1.98
CSDE1-208ENST00000524652 IL1RNP18510 177 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 GNAZP19086 355 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 TAC1P20366 129 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 F8A1P23610 371 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 CSTF2P33240 577 aaKnown RBP eCLIP2.7□□□□□ -1.98
CSDE1-208ENST00000524652 RORAP35398 523 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 BSGP35613 385 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 AHRP35869 848 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 HSD17B2P37059 387 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 HNF4AP41235 474 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 TSPAN7P41732 249 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 OR1D4P47884 311 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 SLC1A6P48664 564 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 CCR8P51685 355 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 CCNG1P51959 295 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 HNRNPFP52597 415 aaKnown RBP2.7□□□□□ -1.98
CSDE1-208ENST00000524652 SEC61BP60468 96 aaKnown RBP2.7□□□□□ -1.98
CSDE1-208ENST00000524652 RAB8AP61006 207 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 ABCE1P61221 599 aaKnown RBP2.7□□□□□ -1.98
CSDE1-208ENST00000524652 RPS15AP62244 130 aaKnown RBP2.7□□□□□ -1.98
CSDE1-208ENST00000524652 OLR1P78380 273 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 MAT1AQ00266 395 aaKnown RBP2.7□□□□□ -1.98
CSDE1-208ENST00000524652 PMP22Q01453 160 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 HMGCS1Q01581 520 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 IRF8Q02556 426 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 RELAQ04206 551 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 RELQ04864 619 aaPredicted RBP2.7□□□□□ -1.98
CSDE1-208ENST00000524652 FOXM1Q08050 763 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 TBL3Q12788 808 aaKnown RBP2.7□□□□□ -1.98
CSDE1-208ENST00000524652 LCP2Q13094 533 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 DDX39BQ13838 428 aaKnown RBP2.7□□□□□ -1.98
CSDE1-208ENST00000524652 KIAA0040Q15053 153 aa2.7□□□□□ -1.98
CSDE1-208ENST00000524652 CLPPQ16740 277 aaPredicted RBP2.7□□□□□ -1.98
CSDE1-208ENST00000524652 KRTAP21-3Q3LHN1 58 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms