RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 ING5Q8WYH8 240 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 EXT2Q93063 718 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 ISG20Q96AZ6 181 aaKnown RBP3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 ZNF707Q96C28 371 aaPredicted RBP3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 ECHDC3Q96DC8 303 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 CCDC126Q96EE4 140 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 CNDP1Q96KN2 507 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 LYSMD1Q96S90 227 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 GPR21Q99679 349 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 TREX2Q9BQ50 279 aaPredicted RBP3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 C19orf43Q9BQ61 176 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 CCDC28BQ9BUN5 200 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 ERVK-6Q9BXR3 956 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 DERL2Q9GZP9 239 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 C1orf21Q9H246 121 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 MMADHCQ9H3L0 296 aaPredicted RBP3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 WDR55Q9H6Y2 383 aaPredicted RBP3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 MED20Q9H944 212 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 TBC1D17Q9HA65 648 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 NDE1Q9NXR1 346 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 TAS2R13Q9NYV9 303 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 GALPQ9UBC7 116 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 RPL26L1Q9UNX3 145 aaKnown RBP3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 HS3ST2Q9Y278 367 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 TICRRQ7Z2Z1 1910 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 LAMA3Q16787 3333 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 REV3LO60673 3130 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 COL4A2P08572 1712 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 CHD9Q3L8U1 2897 aa3.3□□□□□ -1.88
CTHRC1-204ENST00000520880 ANKUB1A6NFN9 424 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 TRPC5OSA6NMA1 111 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 IQCF5A8MTL0 148 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 SUPT3HB4E1H0 165 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 WASH3PC4AMC7 463 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 CDC7O00311 574 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 PRMT5O14744 637 aaPredicted RBP3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 CHUKO15111 745 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 PFDN6O15212 129 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 SMIM24O75264 130 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 VPS26AO75436 327 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 SUPT3HO75486 399 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 ECI2O75521 394 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 TM7SF2O76062 418 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 CDK14O94921 469 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 SIX3O95343 332 aaPredicted RBP3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 HPRP00739 348 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 IGHEP01854 428 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 CA3P07451 260 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 RPS17P08708 135 aaKnown RBP3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 TPBGLP0DKB5 382 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 VPREB1P12018 145 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 COX4I1P13073 169 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 CD1EP15812 388 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 TSPAN8P19075 237 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 NCF2P19878 526 aaPredicted RBP3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 IMPDH1P20839 514 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 RPS3P23396 243 aaKnown RBP eCLIP3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 PIK3R1P27986 724 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 SPAM1P38567 509 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 CCNHP51946 323 aaPredicted RBP3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 RAP1GDS1P52306 607 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 ATP6V0D1P61421 351 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 KDSRQ06136 332 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 RAD51Q06609 339 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 TSNQ15631 228 aaKnown RBP3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 CHRNA6Q15825 494 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 ODF4Q2M2E3 257 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 UGT3A2Q3SY77 523 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 DNAL1Q4LDG9 190 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 TCEAL5Q5H9L2 206 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 CLEC6AQ6EIG7 209 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 CERS6Q6ZMG9 384 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 CYHR1Q6ZMK1 362 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 RFLNAQ6ZTI6 216 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 TAS2R42Q7RTR8 314 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 SNX20Q7Z614 316 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 ADGRD2Q7Z7M1 963 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 SERPINA9Q86WD7 417 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 CPNE9Q8IYJ1 553 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 STK40Q8N2I9 435 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 RYBPQ8N488 228 aaPredicted RBP3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 FBXO39Q8N4B4 442 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 SIDT2Q8NBJ9 832 aaKnown RBP3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 GPR26Q8NDV2 337 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 ITFG1Q8TB96 612 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 STAG3L4Q8TBR4 150 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 EEF1AKMT1Q8WVE0 214 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 APOBEC4Q8WW27 367 aaKnown RBP3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 MCUR1Q96AQ8 359 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 OTUB2Q96DC9 234 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 SLC45A3Q96JT2 553 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 PPP1R36Q96LQ0 422 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 CATSPER2Q96P56 530 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 LRRC3BQ96PB8 259 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 MCCC1Q96RQ3 725 aaPredicted RBP3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 BBS2Q9BXC9 721 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 CCDC68Q9H2F9 335 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 MTIF3Q9H2K0 278 aaKnown RBP3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 LINC00597Q9H2U6 94 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms