RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 PSMD9O00233 223 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 GABRPO00591 440 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 C21orf58P58505 322 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 GMFBP60983 142 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 HSF2Q03933 536 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 NSDHLQ15738 373 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 AGAP6Q5VW22 663 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 KIAA1211LQ6NV74 962 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 ULK3Q6PHR2 472 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 OR6C4Q8NGE1 309 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 THAP3Q8WTV1 239 aaPredicted RBP10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 DNAJA4Q8WW22 397 aaPredicted RBP10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 DAZLQ92904 295 aaKnown RBP10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 FGF14Q92915 247 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 RSPRY1Q96DX4 576 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 AGAP4Q96P64 663 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 HHIPQ96QV1 700 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 GPER1Q99527 375 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 FUZQ9BT04 418 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 TP63Q9H3D4 680 aaPredicted RBP10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 RNF121Q9H920 327 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 MED17Q9NVC6 651 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 TAS2R10Q9NYW0 307 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 EIF3KQ9UBQ5 218 aaKnown RBP10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 MLXQ9UH92 298 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 NUFIP1Q9UHK0 495 aaKnown RBP10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 ATG2BQ96BY7 2078 aa10.49□□□□□ -0.73
PCDHGB4-201ENST00000519479 CENPBD1B2RD01 187 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 C17orf105B2RV13 164 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 LINC01565O15544 149 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 AQP9O43315 295 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 PIP5K1CO60331 668 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 DPM1O60762 260 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 NCR1O76036 304 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 PRKCAP17252 672 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 RORAP35398 523 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 DUSP3P51452 185 aaPredicted RBP10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 NTRK2Q16620 822 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 C1orf189Q5VU69 101 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 PRAMEF8Q5VWM4 474 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 PRAMEF7Q5VXH5 474 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 BTLAQ7Z6A9 289 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 LRRC56Q8IYG6 542 aaPredicted RBP10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 LINC01555Q8NAE3 123 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 OR13H1Q8NG92 308 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 OR7G2Q8NG99 324 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 OR5T3Q8NGG3 340 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 LRRC3BQ96PB8 259 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 UBQLN3Q9H347 655 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 BCL2L10Q9HD36 194 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 SLAMF7Q9NQ25 335 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 SLC35A3Q9Y2D2 325 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 ARRDC5A6NEK1 342 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 PCMT1P22061 227 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 PRKACBP22694 351 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 ETV5P41161 510 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 ETV1P50549 477 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 TPMTP51580 245 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 HNRNPKP61978 463 aaKnown RBP eCLIP10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 MAT1AQ00266 395 aaKnown RBP10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 TMEM196Q5HYL7 178 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 TMEM151BQ8IW70 566 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 ADGRF3Q8IZF5 1079 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 CADM3Q8N126 398 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 TRMT10AQ8TBZ6 339 aaKnown RBP10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 SLC6A20Q9NP91 592 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 AKIP1Q9NQ31 210 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 KLHL21Q9UJP4 597 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 IFNA6P05013 189 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 SPARCP09486 303 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 PTPN6P29350 595 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 SERTAD2Q14140 314 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 ACSM3Q53FZ2 586 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 NXNL2Q5VZ03 156 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 RNF113BQ8IZP6 322 aaKnown RBP10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 AKAP1Q92667 903 aaKnown RBP eCLIP10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 ANKRD19PQ9H560 264 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 TRPV4Q9HBA0 871 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 HHATLQ9HCP6 504 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 KLRF1Q9NZS2 232 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 OSGIN1Q9UJX0 560 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 PPIEQ9UNP9 301 aaKnown RBP10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 PLCL2Q9UPR0 1127 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 PIKFYVEQ9Y2I7 2098 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 A0A0A6YYD5 115 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 FAM25EA8MYX2 175 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 NPIPA5E9PKD4 350 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 SULT1C4O75897 302 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 KIAA1024LP59773 190 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 ERVK-25P63136 954 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 MESP2Q0VG99 397 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 SNTB2Q13425 540 aaKnown RBP10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 DEFB133Q30KQ1 61 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 ZNF793Q6ZN11 406 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 ZNF627Q7L945 461 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 DGLUCYQ7Z3D6 616 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 PRR22Q8IZ63 422 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 NPIPA1Q9UND3 350 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 SIT1Q9Y3P8 196 aa10.48□□□□□ -0.73
PCDHGB4-201ENST00000519479 TRPM6Q9BX84 2022 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms