RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 PRKCAP17252 672 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 EFNA1P20827 205 aaPredicted RBP12.11□□□□□ -0.47
VDAC3-204ENST00000519072 ENPP1P22413 925 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 RAC3P60763 192 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 FAPQ12884 760 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 SELENBP1Q13228 472 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 TOMM34Q15785 309 aaPredicted RBP12.11□□□□□ -0.47
VDAC3-204ENST00000519072 SLC25A53Q5H9E4 307 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.11□□□□□ -0.47
VDAC3-204ENST00000519072 KANK2Q63ZY3 851 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 SSX8Q7RTT4 187 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 DTX2Q86UW9 622 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 HOMEZQ8IX15 550 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 IFT20Q8IY31 132 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 CHMP6Q96FZ7 201 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 MRGPRX4Q96LA9 322 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 HS6ST2Q96MM7 605 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 PSD2Q9BQI7 771 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 ACTRT3Q9BYD9 372 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 C12orf65Q9H3J6 166 aaKnown RBP12.11□□□□□ -0.47
VDAC3-204ENST00000519072 ALG2Q9H553 416 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 CXorf36Q9H7Y0 433 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 BARX1Q9HBU1 254 aaPredicted RBP12.11□□□□□ -0.47
VDAC3-204ENST00000519072 CISD1Q9NZ45 108 aaKnown RBP12.11□□□□□ -0.47
VDAC3-204ENST00000519072 KLHL9Q9P2J3 617 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 ATP6V1HQ9UI12 483 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 FIS1Q9Y3D6 152 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 NBEAL1Q6ZS30 2694 aa12.11□□□□□ -0.47
VDAC3-204ENST00000519072 HEATR1Q9H583 2144 aaKnown RBP12.1□□□□□ -0.47
VDAC3-204ENST00000519072 IGHV3-15A0A0B4J1V0 119 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 NPIPA5A0A0B4J1W7 369 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 RNF212BA8MTL3 300 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 NPIPA7E9PJI5 369 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 NPIPB9F8W1W9 429 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 ETV2O00321 342 aaPredicted RBP12.1□□□□□ -0.47
VDAC3-204ENST00000519072 SCAMP2O15127 329 aaKnown RBP12.1□□□□□ -0.47
VDAC3-204ENST00000519072 ADAM11O75078 769 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 NDUFS7O75251 213 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 CHEK2O96017 543 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 IFNA2P01563 188 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 KRT16P08779 473 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 FAM153BP0C7A2 387 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 LINC00032P0C843 101 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 NPIPA8P0DM63 369 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 SLC7A1P30825 629 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 HPCAL1P37235 193 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 RPL3P39023 403 aaKnown RBP12.1□□□□□ -0.47
VDAC3-204ENST00000519072 RNF144AP50876 292 aaPredicted RBP12.1□□□□□ -0.47
VDAC3-204ENST00000519072 ATP12AP54707 1039 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 PPA1Q15181 289 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 FAM153CQ494X1 144 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 GALNTL6Q49A17 601 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 DCST2Q5T1A1 773 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 CCDC63Q8NA47 563 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 ATP6V1C2Q8NEY4 427 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 OR56A1Q8NGH5 318 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 PSMA8Q8TAA3 256 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 ADAMTS15Q8TE58 950 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 TRMOQ9BU70 441 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 YAE1D1Q9NRH1 226 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 FAIMQ9NVQ4 179 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 GPATCH2Q9NW75 528 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 PRSS50Q9UI38 385 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 GDF2Q9UK05 429 aaPredicted RBP12.1□□□□□ -0.47
VDAC3-204ENST00000519072 DNAJC15Q9Y5T4 150 aa12.1□□□□□ -0.47
VDAC3-204ENST00000519072 GOLGA8QA0A0J9YX86 632 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 A0A1W2PNR3 127 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 GOLGA8OA6NCC3 632 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 SHISA9B4DS77 424 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 GOLGA8NF8WBI6 632 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 GTPBP1O00178 669 aaKnown RBP12.09□□□□□ -0.47
VDAC3-204ENST00000519072 COPEO14579 308 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 EIF4E2O60573 245 aaKnown RBP12.09□□□□□ -0.47
VDAC3-204ENST00000519072 CYTIPO60759 359 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 RAMP1O60894 148 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 LYZL6O75951 148 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 COX5AP20674 150 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 CCT3P49368 545 aaKnown RBP12.09□□□□□ -0.47
VDAC3-204ENST00000519072 RASGEF1BQ0VAM2 473 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 TP53BP2Q13625 1128 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 STK11Q15831 433 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 NRF1Q16656 503 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 NDUFAF6Q330K2 333 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 TIMM23BQ5SRD1 257 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 C10orf107Q8IVU9 208 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 OR7A2PQ8NGA2 310 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 OR5W2Q8NH69 310 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 OR5P2Q8WZ92 322 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 ZNF524Q96C55 264 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 MUCL1Q96DR8 90 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 GATA5Q9BWX5 397 aaPredicted RBP12.09□□□□□ -0.47
VDAC3-204ENST00000519072 ANKZF1Q9H8Y5 726 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 MID2Q9UJV3 735 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 FAF1Q9UNN5 650 aaPredicted RBP12.09□□□□□ -0.47
VDAC3-204ENST00000519072 DTNAQ9Y4J8 743 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 KCNE3Q9Y6H6 103 aa12.09□□□□□ -0.47
VDAC3-204ENST00000519072 ZNF724A8MTY0 619 aa12.08□□□□□ -0.48
VDAC3-204ENST00000519072 ESPNB1AK53 854 aa12.08□□□□□ -0.48
VDAC3-204ENST00000519072 TMEM114B3SHH9 223 aa12.08□□□□□ -0.48
VDAC3-204ENST00000519072 SMAD9O15198 467 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms