RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 GSG1Q2KHT4 349 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 ZNF658BQ4V348 819 aaPredicted RBP8.98□□□□□ -0.97
VCAN-210ENST00000513960 TP53I3Q53FA7 332 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 FAM74A1Q5RGS3 127 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 PRPF38BQ5VTL8 546 aaKnown RBP8.98□□□□□ -0.97
VCAN-210ENST00000513960 KHDRBS2Q5VWX1 349 aaKnown RBP8.98□□□□□ -0.97
VCAN-210ENST00000513960 TMEM88Q6PEY1 159 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 LRFN4Q6PJG9 635 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 NHLRC1Q6VVB1 395 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 OAFQ86UD1 273 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 GPAT4Q86UL3 456 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 LRRC56Q8IYG6 542 aaPredicted RBP8.98□□□□□ -0.97
VCAN-210ENST00000513960 STPG2Q8N412 459 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 RAB42Q8N4Z0 105 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 OR52B4Q8NGK2 314 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 C4orf36Q96KX1 117 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 HEXA-AS1Q9H8Q6 139 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 SLC39A1Q9NY26 324 aa8.98□□□□□ -0.97
VCAN-210ENST00000513960 MEIKINA0A087WXM9 373 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 ANXA2P2A6NMY6 339 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 HMGN4O00479 90 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 PCDH8O95206 1070 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 MT-ND5P03915 603 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 NAA10P41227 235 aaPredicted RBP8.97□□□□□ -0.97
VCAN-210ENST00000513960 CCR8P51685 355 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 E2F1Q01094 437 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 TRAM2Q15035 370 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 BEX5Q5H9J7 111 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 OR8K3Q8NH51 312 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 MCHR1Q99705 422 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 KCNJ15Q99712 375 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 NRTNQ99748 197 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 DPH1Q9BZG8 443 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 OR52A5Q9H2C5 316 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 HINT3Q9NQE9 182 aaKnown RBP8.97□□□□□ -0.97
VCAN-210ENST00000513960 TAS2R10Q9NYW0 307 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 POMT2Q9UKY4 750 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 OR10H1Q9Y4A9 318 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 MEIS3P1A6NDR6 274 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 H7BY64 318 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 PLPP1O14494 284 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 CREBL2O60519 120 aaPredicted RBP8.97□□□□□ -0.97
VCAN-210ENST00000513960 SLC35G4P0C7Q5 338 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 HSD17B2P37059 387 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 CLDN2P57739 230 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 ZNF273Q14593 569 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 MELKQ14680 651 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 ZNF750Q32MQ0 723 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 NKAIN4Q8IVV8 208 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 OR2T33Q8NG76 320 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 OR51A7Q8NH64 312 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 LRRC46Q96FV0 321 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 PRAP1Q96NZ9 151 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 PCBD2Q9H0N5 130 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 TMEM168Q9H0V1 697 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 NEUROD4Q9HD90 331 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 ZDHHC4Q9NPG8 344 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 FANCFQ9NPI8 374 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 WASH6PQ9NQA3 447 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 PTTG3PQ9NZH4 202 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 DSPPQ9NZW4 1301 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 FAM25EA8MYX2 175 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 KRBOX1C9JBD0 128 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 E9PI62 339 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 GOSR2O14653 212 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 NARSO43776 548 aaKnown RBP8.97□□□□□ -0.97
VCAN-210ENST00000513960 GMDSO60547 372 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 HLA-DQB1P01920 261 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 ANKRD34CP0C6C1 535 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 ZNF806P0C7X5 589 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 FAM157BP0CG42 384 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 NPR2P20594 1047 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 MC2RQ01718 297 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 ST3GAL3Q11203 375 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 KRT33BQ14525 404 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 TMEM52BQ4KMG9 183 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 C4orf46Q504U0 113 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 HAGHLQ6PII5 290 aaPredicted RBP8.97□□□□□ -0.97
VCAN-210ENST00000513960 FAM129CQ86XR2 697 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 HDDC3Q8N4P3 179 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 PLA2G15Q8NCC3 412 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 LGALS14Q8TCE9 139 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 HSD17B8Q92506 261 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 OSTF1Q92882 214 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 C16orf58Q96GQ5 468 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 C12orf57Q99622 126 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 NOX3Q9HBY0 568 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 FGF20Q9NP95 211 aaPredicted RBP8.97□□□□□ -0.97
VCAN-210ENST00000513960 SIRT4Q9Y6E7 314 aaPredicted RBP8.97□□□□□ -0.97
VCAN-210ENST00000513960 MTNR1BP49286 362 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 OR12D2P58182 307 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 EEF1A2Q05639 463 aaKnown RBP8.97□□□□□ -0.97
VCAN-210ENST00000513960 ZNF169Q14929 603 aaPredicted RBP8.97□□□□□ -0.97
VCAN-210ENST00000513960 ODF4Q2M2E3 257 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 BTN2A1Q7KYR7 527 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 NR2C2APQ86WQ0 139 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 NUDT13Q86X67 352 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 ETFBKMTQ8IXQ9 262 aa8.97□□□□□ -0.97
VCAN-210ENST00000513960 C12orf76Q8N812 135 aaPredicted RBP8.97□□□□□ -0.97
VCAN-210ENST00000513960 OR4Q3Q8NH05 313 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms