RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 CDRT15Q96T59 188 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 PRR14Q9BWN1 585 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 SPATA9Q9BWV2 254 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 LAT2Q9GZY6 243 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 PTGES2Q9H7Z7 377 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 TINAGQ9UJW2 476 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 OSGIN2Q9Y236 505 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 SLC35A3Q9Y2D2 325 aa8.88□□□□□ -0.99
TOPBP1-209ENST00000513818 NBASA2RRP1 2371 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 OR2M5A3KFT3 312 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 CDHR4A6H8M9 788 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 FAM47E-STBD1D6RA91 191 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 H0YC42 278 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 H3BML4 177 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 M0QX08 132 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 CXCR6O00574 342 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 GSTA4O15217 222 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 SEC14L5O43304 696 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 ZIC3O60481 467 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 DNAJA2O60884 412 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 MFN2O95140 757 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 TPOP07202 933 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 LINGO3P0C6S8 592 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 PEPDP12955 493 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 ETS2P15036 469 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 ABOP16442 354 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 CD247P20963 164 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 PTNP21246 168 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 ZNF41P51814 821 aaPredicted RBP8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 TPD52P55327 224 aaPredicted RBP8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 CRYZQ08257 329 aaKnown RBP8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 CBFBQ13951 182 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 DUSP7Q16829 419 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 EIF2S3LQ2VIR3 472 aaKnown RBP8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 RNF220Q5VTB9 566 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 C1QL3Q5VWW1 255 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 ERICH5Q6P6B1 374 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 RBM45Q8IUH3 476 aaKnown RBP8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 UBQLNLQ8IYU4 475 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 CADM2Q8N3J6 435 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 METTL25Q8N6Q8 603 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 ST6GALNAC3Q8NDV1 305 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 TOR1AIP2Q8NFQ8 470 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 OR4D11Q8NGI4 311 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 OR5W2Q8NH69 310 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 NEIL3Q8TAT5 605 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 DNAJA3Q96EY1 480 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 ZNF607Q96SK3 696 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 UGT2B28Q9BY64 529 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 PCDHAC1Q9H158 963 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 CTPS2Q9NRF8 586 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 PNPLA3Q9NST1 481 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 QPCTLQ9NXS2 382 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 IFT52Q9Y366 437 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 V9GYQ6 96 aa8.87□□□□□ -0.99
TOPBP1-209ENST00000513818 KIAA1549Q9HCM3 1950 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 ZGRF1Q86YA3 2104 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 TRGV8A0A0C4DH27 118 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 KDM4EB2RXH2 506 aaPredicted RBP8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 AQP7O14520 342 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 EIF4E2O60573 245 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 HCN1O60741 890 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 SLC19A2O60779 497 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 PRKCAP17252 672 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 BMP7P18075 431 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 CCNA2P20248 432 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 SHC1P29353 583 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 PRKAR1BP31321 381 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 PTGS2P35354 604 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 ADH7P40394 386 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 IDH2P48735 452 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 SUMO3P55854 103 aaPredicted RBP8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 GFRA1P56159 465 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 SRYQ05066 204 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 EPS8Q12929 822 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 BNIP1Q12981 228 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 GANABQ14697 944 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 KRTCAP3Q53RY4 240 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 CYBRD1Q53TN4 286 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 SAMD4BQ5PRF9 694 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 INTS11Q5TA45 600 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 AP1ARQ63HQ0 302 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 ALKBH2Q6NS38 261 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 ARHGAP11AQ6P4F7 1023 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 DHRS4L2Q6PKH6 230 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 C6orf89Q6UWU4 347 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 CCDC80Q76M96 950 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 PATL1Q86TB9 770 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 ATCAYQ86WG3 371 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 CMIPQ8IY22 773 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 RPRMLQ8N4K4 120 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 ATP6V1C2Q8NEY4 427 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 ZNF563Q8TA94 476 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 GPR119Q8TDV5 335 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 SLC26A7Q8TE54 656 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 FAM162AQ96A26 154 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 CCDC124Q96CT7 223 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 SLC7A6OSQ96CW6 309 aaPredicted RBP8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 TPD52L3Q96J77 140 aa8.86□□□□□ -0.99
TOPBP1-209ENST00000513818 SPATA5L1Q9BVQ7 753 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms